A collinearity-incorporating homology inference strategy for connecting emerging assemblies in the triticeae tribe as a pilot practice in the plant pangenomic era
Plant genome sequencing has dramatically increased, and some species even have
multiple high-quality reference versions. Demands for clade-specific homology inference …
multiple high-quality reference versions. Demands for clade-specific homology inference …
[HTML][HTML] Decoding sex: Elucidating sex determination and how high-quality genome assemblies are untangling the evolutionary dynamics of sex chromosomes
L Ramos, A Antunes - Genomics, 2022 - Elsevier
Sexual reproduction is a diverse and widespread process. In gonochoristic species, the
differentiation of sexes occurs through diverse mechanisms, influenced by environmental …
differentiation of sexes occurs through diverse mechanisms, influenced by environmental …
[图书][B] Biological collections: Ensuring critical research and education for the 21st century
National Academies of Sciences, Division on Earth… - 2021 - books.google.com
Biological collections are a critical part of the nation's science and innovation infrastructure
and a fundamental resource for understanding the natural world. Biological collections …
and a fundamental resource for understanding the natural world. Biological collections …
Comparative genomic analysis of the DUF34 protein family suggests role as a metal ion chaperone or insertase
Members of the DUF34 (domain of unknown function 34) family, also known as the NIF3
protein superfamily, are ubiquitous across superkingdoms. Proteins of this family have been …
protein superfamily, are ubiquitous across superkingdoms. Proteins of this family have been …
PlantTribes2: Tools for comparative gene family analysis in plant genomics
Plant genome-scale resources are being generated at an increasing rate as sequencing
technologies continue to improve and raw data costs continue to fall; however, the cost of …
technologies continue to improve and raw data costs continue to fall; however, the cost of …
Venom gene sequence diversity and expression jointly shape diet adaptation in pitvipers
Understanding the joint roles of protein sequence variation and differential expression
during adaptive evolution is a fundamental, yet largely unrealized goal of evolutionary …
during adaptive evolution is a fundamental, yet largely unrealized goal of evolutionary …
Phylogenomics of the ecdysteroid kinase-like (EcKL) gene family in insects highlights roles in both steroid hormone metabolism and detoxification
JL Scanlan, C Robin - Genome Biology and Evolution, 2024 - academic.oup.com
The evolutionary dynamics of large gene families can offer important insights into the
functions of their individual members. While the ecdysteroid kinase-like (EcKL) gene family …
functions of their individual members. While the ecdysteroid kinase-like (EcKL) gene family …
Novel metric for hyperbolic phylogenetic tree embeddings
H Matsumoto, T Mimori… - Biology Methods and …, 2021 - academic.oup.com
Advances in experimental technologies, such as DNA sequencing, have opened up new
avenues for the applications of phylogenetic methods to various fields beyond their …
avenues for the applications of phylogenetic methods to various fields beyond their …
A genomic panel for studying C3‐C4 intermediate photosynthesis in the Brassiceae tribe
R Guerreiro, VS Bonthala, U Schlüter… - Plant, cell & …, 2023 - Wiley Online Library
Research on C4 and C3‐C4 photosynthesis has attracted significant attention because the
understanding of the genetic underpinnings of these traits will support the introduction of its …
understanding of the genetic underpinnings of these traits will support the introduction of its …
Comparative transcriptional analyses of Pleurotus ostreatus mutants on beech wood and rice straw shed light on substrate-biased gene regulation
H Wu, T Nakazawa, H Xu, R Yang, D Bao… - Applied Microbiology …, 2021 - Springer
Distinct wood degraders occupying their preferred habitats have biased enzyme repertoires
that are well fitted to their colonized substrates. Pleurotus ostreatus, commonly found on …
that are well fitted to their colonized substrates. Pleurotus ostreatus, commonly found on …