[HTML][HTML] PCNA loaders and unloaders—One ring that rules them all

M Arbel, K Choudhary, O Tfilin, M Kupiec - Genes, 2021 - mdpi.com
During each cell duplication, the entirety of the genomic DNA in every cell must be
accurately and quickly copied. Given the short time available for the chore, the requirement …

[HTML][HTML] Structural transition of the nucleosome during transcription elongation

T Kujirai, H Ehara, S Sekine, H Kurumizaka - Cells, 2023 - mdpi.com
In eukaryotes, genomic DNA is tightly wrapped in chromatin. The nucleosome is a basic unit
of chromatin, but acts as a barrier to transcription. To overcome this impediment, the RNA …

Spatiotemporal kinetics of CAF-1-dependent chromatin maturation ensures transcription fidelity during S-phase

B Chen, HK MacAlpine, AJ Hartemink… - Genome …, 2023 - genome.cshlp.org
Proper maintenance of epigenetic information after replication is dependent on the rapid
assembly and maturation of chromatin. Chromatin Assembly Complex 1 (CAF-1) is a …

Mrhst4 gene, coding for NAD+-dependent deacetylase is involved in citrinin production of Monascus ruber

Y Hu, Y Zheng, B Liu, Y Gong… - Journal of Applied …, 2023 - academic.oup.com
Abstract Aims In this study, Mrhst4, encoding a member of NAD+-dependent histone
deacetylase (HDAC), was deleted to evaluate its regulation on the production of Monascus …

Cysteine‐Assisted Click‐Chemistry for Proximity‐Driven, Site‐Specific Acetylation of Histones

CF Afonso, MC Marques, JPM António… - Angewandte Chemie …, 2022 - Wiley Online Library
Post‐translational modifications of histones are essential in the regulation of chromatin
structure and function. Among these modifications, lysine acetylation is one of the most …

The asymmetric distribution of RNA polymerase II and nucleosomes on replicated daughter genomes is caused by differences in replication timing between the …

R Ziane, A Camasses, M Radman-Livaja - Genome Research, 2022 - genome.cshlp.org
Chromatin features are thought to have a role in the epigenetic transmission of transcription
states from one cell generation to the next. It is unclear how chromatin structure survives …

[HTML][HTML] Therapeutical interference with the epigenetic landscape of germ cell tumors: a comparative drug study and new mechanistical insights

MR Müller, A Burmeister, MA Skowron, A Stephan… - Clinical …, 2022 - Springer
Background Type II germ cell tumors (GCT) are the most common solid cancers in males of
age 15 to 35 years. Treatment of these tumors includes cisplatin-based therapy achieving …

Functional interaction between the RNA exosome and the sirtuin deacetylase Hst3 maintains transcriptional homeostasis

AR Bryll, CL Peterson - Genes & Development, 2022 - genesdev.cshlp.org
Eukaryotic cells maintain an optimal level of mRNAs through unknown mechanisms that
balance RNA synthesis and degradation. We found that inactivation of the RNA exosome …

The circular logic of mRNA homeostasis

AR Bryll, CL Peterson - Transcription, 2023 - Taylor & Francis
Eukaryotic cells rely upon dynamic, multifaceted regulation at each step of RNA biogenesis
to maintain mRNA pools and ensure normal protein synthesis. Studies in budding yeast …

[HTML][HTML] TrancriptomeReconstructoR: data-driven annotation of complex transcriptomes

M Ivanov, A Sandelin, S Marquardt - Bmc Bioinformatics, 2021 - Springer
Background The quality of gene annotation determines the interpretation of results obtained
in transcriptomic studies. The growing number of genome sequence information calls for …