[HTML][HTML] Computation-aided studies related to the induction of specialized metabolite biosynthesis in microbial co-cultures: An introductory overview

T Boruta - Computational and Structural Biotechnology Journal, 2023 - Elsevier
Co-cultivation is an effective method of inducing the production of specialized metabolites
(SMs) in microbial strains. By mimicking the ecological interactions that take place in natural …

[HTML][HTML] Patterns and determinants of the global herbivorous mycobiome

CH Meili, AL Jones, AX Arreola, J Habel… - Nature …, 2023 - nature.com
Despite their role in host nutrition, the anaerobic gut fungal (AGF) component of the
herbivorous gut microbiome remains poorly characterized. Here, to examine global patterns …

[HTML][HTML] Symbioses between fungi and bacteria: from mechanisms to impacts on biodiversity

TE Pawlowska - Current Opinion in Microbiology, 2024 - Elsevier
Symbiotic interactions between fungi and bacteria range from positive to negative. They are
ubiquitous in free-living as well as host-associated microbial communities worldwide. Yet …

[HTML][HTML] Genome-wide fitness profiling reveals molecular mechanisms that bacteria use to interact with Trichoderma atroviride exometabolites

JM Villalobos-Escobedo, MB Mercado-Esquivias… - PLoS …, 2023 - journals.plos.org
Trichoderma spp. are ubiquitous rhizosphere fungi capable of producing several classes of
secondary metabolites that can modify the dynamics of the plant-associated microbiome …

Transcriptomics integrated with metabolomics reveal the competitive relationship between co-cultured Trichoderma asperellum HG1 and Bacillus subtilis Tpb55

Q Li, W Lin, X Zhang, M Wang, Y Zheng, X Wang… - Microbiological …, 2024 - Elsevier
Microbial co-culture has proven to be an effective way to improve the ability of
microorganisms to biocontrol. However, the interactive mechanisms of co-cultural microbes …

[HTML][HTML] Impact of Weissella cibaria BYL4.2 and its supernatants on Penicillium chrysogenum metabolism

D Yao, X Wang, L Ma, M Wu, L Xu, Q Yu… - Frontiers in …, 2022 - frontiersin.org
Lactic acid bacteria (LAB) can produce a vast spectrum of antifungal metabolites to inhibit
fungal growth. The purpose of this study was to elucidate the antifungal effect of isolated …

Diversity and community structure of anaerobic gut fungi in the rumen of wild and domesticated herbivores

CH Meili, MA TagElDein, AL Jones… - Applied and …, 2024 - Am Soc Microbiol
The rumen houses a diverse community that plays a major role in the digestion process in
ruminants. Anaerobic gut fungi (AGF) are key contributors to plant digestion in the rumen …

Impact of Bacillus subtilis Antibiotic Bacilysin and Campylobacter jejuni Efflux Pumps on Pathogen Survival in Mixed Biofilms

A Erega, P Stefanic, T Danevčič… - Microbiology …, 2022 - Am Soc Microbiol
The foodborne pathogen Campylobacter jejuni is typically found in an agricultural
environment; in animals, such as birds, as an intestinal commensal; and also in food …

[HTML][HTML] Effect of Growth Media on the Diversity of Neocallimastigomycetes from Non-Rumen Habitats

A Joshi, D Young, L Huang, L Mosberger, B Munk… - Microorganisms, 2022 - mdpi.com
Anaerobic fungi (AF), belonging to the phylum Neocallimastigomycota, are a pivotal
component of the digestive tract microbiome of various herbivorous animals. In the last …

The hidden treasures in endophytic fungi: a comprehensive review on the diversity of fungal bioactive metabolites, usual analytical methodologies, and applications

JBA Dos Reis, AS Lorenzi, DB Pinho, PC Cortelo… - Archives of …, 2024 - Springer
This review provides a comprehensive overview of the key aspects of the natural metabolite
production by endophytic fungi, which has attracted significant attention due to its diverse …