Global transcriptome profiling reveals differential regulatory, metabolic and hormonal networks during somatic embryogenesis in Coffea arabica

R Awada, M Lepelley, D Breton, A Charpagne… - BMC genomics, 2023 - Springer
Background Somatic embryogenesis (SE) is one of the most promising processes for large-
scale dissemination of elite varieties. However, for many plant species, optimizing SE …

GhTCE1–GhTCEE1 dimers regulate transcriptional reprogramming during wound-induced callus formation in cotton

J Deng, W Sun, B Zhang, S Sun, L Xia, Y Miao… - The Plant …, 2022 - academic.oup.com
Wounded plant cells can form callus to seal the wound site. Alternatively, wounding can
cause adventitious organogenesis or somatic embryogenesis. These distinct developmental …

Metabolome and transcriptome association analysis reveals dynamic regulation of purine metabolism and flavonoid synthesis in transdifferentiation during somatic …

H Guo, H Guo, L Zhang, Z Tang, X Yu, J Wu… - International Journal of …, 2019 - mdpi.com
Plant regeneration via somatic embryogenesis (SE) is a key step during genetic
engineering. In the current study, integrated widely targeted metabolomics and RNA …

Genetic dissection of maize embryonic callus regenerative capacity using multi-locus genome-wide association studies

L Ma, M Liu, Y Yan, C Qing, X Zhang, Y Zhang… - Frontiers in plant …, 2018 - frontiersin.org
The regenerative capacity of the embryonic callus, a complex quantitative trait, is one of the
main limiting factors for maize transformation. This trait was decomposed into five traits …

Comparative transcriptome analysis between somatic embryos (SE s) and zygotic embryos in cotton: evidence for stress response functions in SE development

F Jin, L Hu, D Yuan, J Xu, W Gao, L He… - Plant Biotechnology …, 2014 - Wiley Online Library
As a product of asexual reproduction in plants, the somatic embryo (SE) differentiates into a
new plantlet via a zygotic embryogenesis‐like process. Here, we present the phenotypic and …

Somatic embryogenesis induction in woody species: the future after OMICs data assessment

MS Pais - Frontiers in Plant Science, 2019 - frontiersin.org
Very early somatic embryogenesis has been recognized as a powerful method to propagate
plants in vitro. For some woody species and in particular for some coniferous trees, somatic …

Advances in plant regeneration: Shake, rattle and roll

S Ibáñez, E Carneros, PS Testillano, JM Pérez-Pérez - Plants, 2020 - mdpi.com
Some plant cells are able to rebuild new organs after tissue damage or in response to
definite stress treatments and/or exogenous hormone applications. Whole plants can …

Genome-Wide Analysis and Expression Profiling of the SUC and SWEET Gene Families of Sucrose Transporters in Oilseed Rape (Brassica napus L.)

H Jian, K Lu, B Yang, T Wang, L Zhang… - Frontiers in Plant …, 2016 - frontiersin.org
Sucrose is the principal transported product of photosynthesis from source leaves to sink
organs. SUTs/SUCs (sucrose transporters or sucrose carriers) and SWEETs (Sugars Will …

Molecular cloning and functional characterization of a novel cotton CBL-interacting protein kinase gene (GhCIPK6) reveals its involvement in multiple abiotic stress …

L He, X Yang, L Wang, L Zhu, T Zhou, J Deng… - Biochemical and …, 2013 - Elsevier
Plant CIPKs were specific Ser/Thr protein kinases, which were activated through interaction
with calcineurin B-like protein (CBL) containing four EF hands for Ca2+ binding. The …

miR393 contributes to the embryogenic transition induced in vitro in Arabidopsis via the modification of the tissue sensitivity to auxin treatment

AM Wójcik, MD Gaj - Planta, 2016 - Springer
Main conclusion miR393 was found to control embryogenic transition in somatic cells in
Arabidopsis via control of the TIR1 and AFB2 auxin receptors genes of the F-box family …