Multiple forms and functions of premature termination by RNA polymerase II
DL Bentley - Journal of Molecular Biology, 2024 - Elsevier
Eukaryotic genomes are widely transcribed by RNA polymerase II (pol II) both within genes
and in intergenic regions. POL II elongation complexes comprising the polymerase, the DNA …
and in intergenic regions. POL II elongation complexes comprising the polymerase, the DNA …
How is polyadenylation restricted to 3′‐untranslated regions?
K Struhl - Yeast, 2024 - Wiley Online Library
Polyadenylation occurs at numerous sites within 3′‐untranslated regions (3′‐UTRs) but
rarely within coding regions. How does Pol II travel through long coding regions without …
rarely within coding regions. How does Pol II travel through long coding regions without …
Transcription elongation of the plant RNA polymerase IV is prone to backtracking
C Fang, K Huang, X Wu, H Zhang, Z Gu, J Wang… - Science …, 2024 - science.org
RNA polymerase IV (Pol IV) forms a complex with RNA-directed RNA polymerase 2 (RDR2)
to produce double-stranded RNA (dsRNA) precursors essential for plant gene silencing. In …
to produce double-stranded RNA (dsRNA) precursors essential for plant gene silencing. In …
An extrinsic motor directs chromatin loop formation by cohesin
TM Guérin, C Barrington, G Pobegalov… - The EMBO …, 2024 - embopress.org
The ring-shaped cohesin complex topologically entraps two DNA molecules to establish
sister chromatid cohesion. Cohesin also shapes the interphase chromatin landscape with …
sister chromatid cohesion. Cohesin also shapes the interphase chromatin landscape with …
Structural basis of eukaryotic transcription termination by the Rat1 exonuclease complex
T Yanagisawa, Y Murayama, H Ehara, M Goto… - Nature …, 2024 - nature.com
Abstract The 5´–3´ exoribonuclease Rat1/Xrn2 is responsible for the termination of
eukaryotic mRNA transcription by RNAPII. Rat1 forms a complex with its partner proteins …
eukaryotic mRNA transcription by RNAPII. Rat1 forms a complex with its partner proteins …
[HTML][HTML] Mechanisms of RNA Polymerase II termination at the 3'-end of genes
DL Martinez, JQ Svejstrup - Journal of Molecular Biology, 2024 - Elsevier
Abstract RNA polymerase II (RNAPII) is responsible for the synthesis of a diverse set of RNA
molecules, including protein-coding messenger RNAs (mRNAs) and many short non-coding …
molecules, including protein-coding messenger RNAs (mRNAs) and many short non-coding …
[HTML][HTML] ZC3H4/Restrictor exerts a stranglehold on pervasive transcription
C Estell, S West - Journal of Molecular Biology, 2024 - Elsevier
The regulation of transcription by RNA polymerase II (RNAPII) underpins all cellular
processes and is perturbed in thousands of diseases. In humans, RNAPII transcribes∼ …
processes and is perturbed in thousands of diseases. In humans, RNAPII transcribes∼ …
RNAi-based Boolean gates in the yeast Saccharomyces cerevisiae
X Tian, A Volkovinskiy, MA Marchisio - Frontiers in Bioengineering …, 2024 - frontiersin.org
Boolean gates, the fundamental components of digital circuits, have been widely
investigated in synthetic biology because they permit the fabrication of biosensors and …
investigated in synthetic biology because they permit the fabrication of biosensors and …
Assessing contributions of DNA sequences at the 3'end of a yeast gene on yFACT, RNA polymerase II, and nucleosome occupancy
SE Byrd, B Hoyt, SA Ozersky, AW Crocker… - BMC Research …, 2024 - Springer
Objective In past work in budding yeast, we identified a nucleosomal region required for
proper interactions between the histone chaperone complex yFACT and transcribed genes …
proper interactions between the histone chaperone complex yFACT and transcribed genes …
Cohesin chromatin loop formation by an extrinsic motor
TM Guerin, C Barrington, G Pobegalov, MI Molodtsov… - bioRxiv, 2023 - biorxiv.org
The ring-shaped cohesin complex topologically entraps two DNAs to establish sister
chromatid cohesion. Cohesin also shapes the interphase chromatin landscape with wide …
chromatid cohesion. Cohesin also shapes the interphase chromatin landscape with wide …