[HTML][HTML] Microbiome multi-omics network analysis: statistical considerations, limitations, and opportunities

D Jiang, CR Armour, C Hu, M Mei, C Tian… - Frontiers in …, 2019 - frontiersin.org
The advent of large-scale microbiome studies affords newfound analytical opportunities to
understand how these communities of microbes operate and relate to their environment …

Viruses and antiviral immunity in Drosophila

J Xu, S Cherry - Developmental & Comparative Immunology, 2014 - Elsevier
Viral pathogens present many challenges to organisms, driving the evolution of a myriad of
antiviral strategies to combat infections. A wide variety of viruses infect invertebrates …

Symbiosis and the social network of higher plants

M Venkateshwaran, JD Volkening, MR Sussman… - Current Opinion in Plant …, 2013 - Elsevier
In the Internet era, communicating with friends and colleagues via social networks
constitutes a significant proportion of our daily activities. Similarly animals and plants also …

[HTML][HTML] From genotype to phenotype: can systems biology be used to predict Staphylococcus aureus virulence?

NK Priest, JK Rudkin, EJ Feil… - Nature Reviews …, 2012 - nature.com
With the advent of high-throughput whole-genome sequencing, it is now possible to
sequence a bacterial genome in a matter of hours. However, although the presence or …

[HTML][HTML] Scanning a microhabitat: plant-microbe interactions revealed by confocal laser microscopy

M Cardinale - Frontiers in microbiology, 2014 - frontiersin.org
No plant or cryptogam exists in nature without microorganisms associated with its tissues.
Plants as microbial hosts are puzzles of different microhabitats, each of them colonized by …

Current priorities for public health practice in addressing the role of human genomics in improving population health

MJ Khoury, MS Bowen, W Burke, RJ Coates… - American journal of …, 2011 - Elsevier
In spite of accelerating human genome discoveries in a wide variety of diseases of public
health significance, the promise of personalized health care and disease prevention based …

Systems biology of the gut: the interplay of food, microbiota and host at the mucosal interface

VM Dos Santos, M Müller, WM De Vos - Current opinion in biotechnology, 2010 - Elsevier
Our intestinal tract is colonized since birth by complex and subject-specific microbial
communities that interact with the host. The human adult microbiota has recently been …

[HTML][HTML] Leveraging proteomics to understand plant–microbe interactions

D Jayaraman, KL Forshey, PA Grimsrud… - Frontiers in plant …, 2012 - frontiersin.org
Understanding the interactions of plants with beneficial and pathogenic microbes is a
promising avenue to improve crop productivity and agriculture sustainability. Proteomic …

Network and systems medicine: Position paper of the european collaboration on science and technology action on open multiscale systems medicine

B Comte, J Baumbach, A Benis, J Basílio… - Network and systems …, 2020 - liebertpub.com
Introduction: Network and systems medicine has rapidly evolved over the past decade,
thanks to computational and integrative tools, which stem in part from systems biology …

Genome-wide association studies and susceptibility to infectious diseases

MJ Newport, C Finan - Briefings in Functional Genomics, 2011 - academic.oup.com
Progress in genomics and the associated technological, statistical and bioinformatics
advances have facilitated the successful implementation of genome-wide association …