[HTML][HTML] Genome-wide generation and genotyping of informative SNPs to scan molecular signatures for seed yield in chickpea

U Basu, R Srivastava, D Bajaj, V Thakro, A Daware… - Scientific reports, 2018 - nature.com
We discovered 2150 desi and 2199 kabuli accessions-derived SNPs by cultivar-wise
individual assembling of sequence-reads generated through genotyping-by-sequencing of …

[HTML][HTML] Regional association analysis of metaQTLs delineates candidate grain size genes in rice

AV Daware, R Srivastava, AK Singh… - Frontiers in Plant …, 2017 - frontiersin.org
Molecular mapping studies which aim to identify genetic basis of diverse agronomic traits
are vital for marker-assisted crop improvement. Numerous Quantitative Trait Loci (QTLs) …

GBScleanR: robust genotyping error correction using a hidden Markov model with error pattern recognition

T Furuta, T Yamamoto, M Ashikari - Genetics, 2023 - academic.oup.com
Reduced-representation sequencing (RRS) provides cost-effective and time-saving
genotyping platforms. Despite the outstanding advantage of RRS in throughput, the …

[HTML][HTML] Exploiting genotyping by sequencing to characterize the genomic structure of the American cranberry through high-density linkage mapping

G Covarrubias-Pazaran, L Diaz-Garcia, B Schlautman… - BMC genomics, 2016 - Springer
Background The application of genotyping by sequencing (GBS) approaches, combined
with data imputation methodologies, is narrowing the genetic knowledge gap between major …

[图书][B] Polyploidy and hybridization for crop improvement

AS Mason - 2017 - taylorfrancis.com
Many of our current agricultural crops are natural or agricultural hybrids (between two or
more species), or polyploids (containing more than one genome or set of chromosomes) …

[HTML][HTML] Genomics associated interventions for heat stress tolerance in cool season adapted grain legumes

J Kumar, RR Mir, S Shafi, D Sen Gupta… - International Journal of …, 2021 - mdpi.com
Cool season grain legumes occupy an important place among the agricultural crops and
essentially provide multiple benefits including food supply, nutrition security, soil fertility …

[HTML][HTML] Genotyping by Sequencing Reasserts the Close Relationship between Tef and Its Putative Wild Eragrostis Progenitors

D Girma, G Cannarozzi, A Weichert, Z Tadele - Diversity, 2018 - mdpi.com
The genus Eragrostis consists of 350 species, including tef (Eragrostis tef (Zucc.) Trotter), the
only cultivated species in this genus. Very little is known about the genetic potential of these …

ABC transporter-mediated transport of glutathione conjugates enhances seed yield and quality in chickpea

U Basu, HD Upadhyaya, R Srivastava… - Plant …, 2019 - academic.oup.com
The identification of functionally relevant molecular tags is vital for genomics-assisted crop
improvement and enhancement of seed yield, quality, and productivity in chickpea (Cicer …

[HTML][HTML] Construction of a high-density genetic map and QTL mapping for pearl quality-related traits in Hyriopsis cumingii

ZY Bai, XK Han, XJ Liu, QQ Li, JL Li - Scientific reports, 2016 - nature.com
A high-density genetic map is essential for quantitative trait locus (QTL) fine mapping. In this
study, 4,508 effective single nucleotide polymorphism markers (detected using specific …

Construction of a high-density genetic linkage map and QTL mapping for sex and growth traits in Artemia franciscana

X Han, Y Ren, X Ouyang, B Zhang, L Sui - Aquaculture, 2021 - Elsevier
Artemia is not only one of the most important live feed used in larviculture, but also an ideal
experimental organism for scientific research. In the study, SLAF-seq method was used to …