[HTML][HTML] Deimmunization of protein therapeutics–Recent advances in experimental and computational epitope prediction and deletion

LV Zinsli, N Stierlin, MJ Loessner… - Computational and …, 2021 - Elsevier
Biotherapeutics, and antimicrobial proteins in particular, are of increasing interest for human
medicine. An important challenge in the development of such therapeutics is their potential …

[HTML][HTML] Advances of reverse vaccinology for mRNA vaccine design against SARS-CoV-2: a review of methods and tools

MK da Silva, DMO Campos, S Akash, S Akter, LC Yee… - Viruses, 2023 - mdpi.com
mRNA vaccines are a new class of vaccine that can induce potent and specific immune
responses against various pathogens. However, the design of mRNA vaccines requires the …

[HTML][HTML] TANTIGEN 2.0: a knowledge base of tumor T cell antigens and epitopes

G Zhang, L Chitkushev, LR Olsen, DB Keskin… - BMC …, 2021 - Springer
We previously developed TANTIGEN, a comprehensive online database cataloging more
than 1000 T cell epitopes and HLA ligands from 292 tumor antigens. In TANTIGEN 2.0, we …

[HTML][HTML] Epitope-Based Vaccine Target Screening against Highly Pathogenic MERS-CoV: An In Silico Approach Applied to Emerging Infectious Diseases

J Shi, J Zhang, S Li, J Sun, Y Teng, M Wu, J Li, Y Li… - PloS one, 2015 - journals.plos.org
Middle East respiratory syndrome coronavirus (MERS-CoV) with pandemic potential is a
major worldwide threat to public health. However, vaccine development for this pathogen …

[HTML][HTML] The role of major histocompatibility complex in organ transplantation-donor specific anti-major histocompatibility complex antibodies analysis goes to the next …

T Nakamura, T Shirouzu, K Nakata… - International journal of …, 2019 - mdpi.com
Organ transplantation has progressed with the comprehension of the major
histocompatibility complex (MHC). It is true that the outcome of organ transplantation largely …

[HTML][HTML] Relative rate and location of intra-host HIV evolution to evade cellular immunity are predictable

JP Barton, N Goonetilleke, TC Butler, BD Walker… - Nature …, 2016 - nature.com
Human immunodeficiency virus (HIV) evolves within infected persons to escape being
destroyed by the host immune system, thereby preventing effective immune control of …

A catalog of HLA type, HLA expression, and neo-epitope candidates in human cancer cell lines

S Boegel, M Löwer, T Bukur, U Sahin… - …, 2014 - Taylor & Francis
Cancer cell lines are a tremendous resource for cancer biology and therapy development.
These multipurpose tools are commonly used to examine the genetic origin of cancers, to …

Immunoinformatics: an integrated scenario

N Tomar, RK De - Immunology, 2010 - Wiley Online Library
Genome sequencing of humans and other organisms has led to the accumulation of huge
amounts of data, which include immunologically relevant data. A large volume of clinical …

[HTML][HTML] Vaccinomic approach for novel multi epitopes vaccine against severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2)

YA Almofti, KA Abd-Elrahman, EEM Eltilib - BMC immunology, 2021 - Springer
Background The spread of a novel coronavirus termed severe acute respiratory syndrome
coronavirus-2 (SARS-CoV-2) in China and other countries is of great concern worldwide …

[HTML][HTML] Association between germ-line HLA and immune-related adverse events

N Jiang, Y Yu, M Zhang, Y Tang, D Wu… - Frontiers in …, 2022 - frontiersin.org
Background In recent years, significant progress has been made in immune checkpoint
inhibitors (ICIs). However, accompanied by remarkable efficacy, a growing number of …