Transporter annotations are holding up progress in metabolic modeling

J Casey, B Bennion, P D'haeseleer… - Frontiers in Systems …, 2024 - frontiersin.org
Mechanistic, constraint-based models of microbial isolates or communities are a staple in
the metabolic analysis toolbox, but predictions about microbe-microbe and microbe …

SCALiR: A Web Application for Automating Absolute Quantification of Mass Spectrometry-Based Metabolomics Data

LF Ponce, SL Bishop, S Wacker, RA Groves… - Analytical …, 2024 - ACS Publications
Quantitative liquid chromatography–mass spectrometry (LC-MS)-based metabolomics is
becoming an important approach for studying complex biological systems but presents …

The Metabolism of Uropathogenic Bacteria in in Vitro Human Urine Cultures

CCY Chan - 2024 - prism.ucalgary.ca
Urinary tract infections (UTIs) are common infections primarily caused by bacterial
colonization of the host's bladder and/or kidney. Research into the molecular underpinnings …