Carbohydrate-active enzymes (CAZymes) in the gut microbiome
JF Wardman, RK Bains, P Rahfeld… - Nature Reviews …, 2022 - nature.com
The 1013–1014 microorganisms present in the human gut (collectively known as the human
gut microbiota) dedicate substantial percentages of their genomes to the degradation and …
gut microbiota) dedicate substantial percentages of their genomes to the degradation and …
Polysaccharide degradation by the Bacteroidetes: mechanisms and nomenclature
The Bacteroidetes phylum is renowned for its ability to degrade a wide range of complex
carbohydrates, a trait that has enabled its dominance in many diverse environments. The …
carbohydrates, a trait that has enabled its dominance in many diverse environments. The …
Introduction to the human gut microbiota
E Thursby, N Juge - Biochemical journal, 2017 - portlandpress.com
The human gastrointestinal (GI) tract harbours a complex and dynamic population of
microorganisms, the gut microbiota, which exert a marked influence on the host during …
microorganisms, the gut microbiota, which exert a marked influence on the host during …
[HTML][HTML] Adaptive evolution within gut microbiomes of healthy people
Natural selection shapes bacterial evolution in all environments. However, the extent to
which commensal bacteria diversify and adapt within the human gut remains unclear. Here …
which commensal bacteria diversify and adapt within the human gut remains unclear. Here …
Bacteroidetes use thousands of enzyme combinations to break down glycans
P Lapébie, V Lombard, E Drula, N Terrapon… - Nature …, 2019 - nature.com
Unlike proteins, glycan chains are not directly encoded by DNA, but by the specificity of the
enzymes that assemble them. Theoretical calculations have proposed an astronomical …
enzymes that assemble them. Theoretical calculations have proposed an astronomical …
Complex pectin metabolism by gut bacteria reveals novel catalytic functions
The metabolism of carbohydrate polymers drives microbial diversity in the human gut
microbiota. It is unclear, however, whether bacterial consortia or single organisms are …
microbiota. It is unclear, however, whether bacterial consortia or single organisms are …
Polysaccharide utilization loci: fueling microbial communities
JM Grondin, K Tamura, G Déjean, DW Abbott… - Journal of …, 2017 - Am Soc Microbiol
The complex carbohydrates of terrestrial and marine biomass represent a rich nutrient
source for free-living and mutualistic microbes alike. The enzymatic saccharification of these …
source for free-living and mutualistic microbes alike. The enzymatic saccharification of these …
IgA regulates the composition and metabolic function of gut microbiota by promoting symbiosis between bacteria
A Nakajima, A Vogelzang, M Maruya… - Journal of Experimental …, 2018 - rupress.org
Immunoglobulin A (IgA) promotes health by regulating the composition and function of gut
microbiota, but the molecular requirements for such homeostatic IgA function remain …
microbiota, but the molecular requirements for such homeostatic IgA function remain …
Dietary pectic glycans are degraded by coordinated enzyme pathways in human colonic Bacteroides
The major nutrients available to human colonic Bacteroides species are glycans,
exemplified by pectins, a network of covalently linked plant cell wall polysaccharides …
exemplified by pectins, a network of covalently linked plant cell wall polysaccharides …
[HTML][HTML] Interspecies competition impacts targeted manipulation of human gut bacteria by fiber-derived glycans
ML Patnode, ZW Beller, ND Han, J Cheng, SL Peters… - Cell, 2019 - cell.com
Development of microbiota-directed foods (MDFs) that selectively increase the abundance
of beneficial human gut microbes, and their expressed functions, requires knowledge of both …
of beneficial human gut microbes, and their expressed functions, requires knowledge of both …