[HTML][HTML] IHF and Fis as Escherichia coli Cell Cycle Regulators: Activation of the Replication Origin oriC and the Regulatory Cycle of the DnaA Initiator
K Kasho, S Ozaki, T Katayama - International journal of molecular …, 2023 - mdpi.com
This review summarizes current knowledge about the mechanisms of timely binding and
dissociation of two nucleoid proteins, IHF and Fis, which play fundamental roles in the …
dissociation of two nucleoid proteins, IHF and Fis, which play fundamental roles in the …
[HTML][HTML] Open questions about the roles of DnaA, related proteins, and hyperstructure dynamics in the cell cycle
M Kohiyama, J Herrick, V Norris - Life, 2023 - mdpi.com
The DnaA protein has long been considered to play the key role in the initiation of
chromosome replication in modern bacteria. Many questions about this role, however …
chromosome replication in modern bacteria. Many questions about this role, however …
Rep protein accommodates together dsDNA and ssDNA which enables a loop-back mechanism to plasmid DNA replication initiation
K Wegrzyn, M Oliwa, M Nowacka… - Nucleic Acids …, 2023 - academic.oup.com
For DNA replication initiation in Bacteria, replication initiation proteins bind to double-
stranded DNA (dsDNA) and interact with single-stranded DNA (ssDNA) at the replication …
stranded DNA (dsDNA) and interact with single-stranded DNA (ssDNA) at the replication …
[HTML][HTML] Read-through transcription of tRNA underlies the cell cycle-dependent dissociation of IHF from the DnaA-inactivating sequence datA
K Kasho, R Sakai, K Ito, W Nakagaki… - Frontiers in …, 2024 - frontiersin.org
Timely initiation of chromosomal DNA replication in Escherichia coli is achieved by cell cycle-
coordinated regulation of the replication origin, oriC, and the replication initiator, ATP-DnaA …
coordinated regulation of the replication origin, oriC, and the replication initiator, ATP-DnaA …
[HTML][HTML] Toward an understanding of the DNA replication initiation in bacteria
K Wegrzyn, I Konieczny - Frontiers in Microbiology, 2024 - frontiersin.org
Although the mechanism of DNA replication initiation has been investigated for over 50
years, many important discoveries have been made related to this process in recent years …
years, many important discoveries have been made related to this process in recent years …
Replicating Chromosomes in Whole-Cell Models of Bacteria
BR Gilbert, Z Luthey-Schulten - Bacterial Chromatin: Methods and …, 2024 - Springer
Computational models of cells cannot be considered complete unless they include the most
fundamental process of life, the replication of genetic material. In a recent study, we …
fundamental process of life, the replication of genetic material. In a recent study, we …
Open Questions about the Roles of DnaA, Related Proteins and Hyperstructure Dynamics in the Cell Cycle: a Cobblestone in the Pond?
M Kohiyama, J Herrick, V Norris - 2023 - preprints.org
The DnaA protein has long been considered to play the key role in the initiation of
chromosome replication in modern bacteria. Many questions about this role, however …
chromosome replication in modern bacteria. Many questions about this role, however …
[PDF][PDF] Analyses for mechanisms in formation of the replication initiation complex and for functional characteristics of the DNA unwinding region at the replication origin …
盧楚元 - 2023 - catalog.lib.kyushu-u.ac.jp
Initiation of chromosomal replication requires dynamic nucleoprotein complexes. In most
eubacteria, the origin oriC contains multiple DnaA box sequences to which the ubiquitous …
eubacteria, the origin oriC contains multiple DnaA box sequences to which the ubiquitous …
[PDF][PDF] Hypothesis: bacteria live on the edge of phase transitions with a cell cycle regulated by a water-clock
VNC UR - 2024 - scholar.archive.org
A fundamental problem in biology is how cells obtain the reproducible, coherent phenotypes
needed for natural selection to act or, put differently, how cells manage to limit their …
needed for natural selection to act or, put differently, how cells manage to limit their …
[HTML][HTML] Dynamics of chromosome organization in a minimal bacterial cell
BR Gilbert, ZR Thornburg, TA Brier… - Frontiers in Cell and …, 2023 - frontiersin.org
Computational models of cells cannot be considered complete unless they include the most
fundamental process of life, the replication and inheritance of genetic material. By creating a …
fundamental process of life, the replication and inheritance of genetic material. By creating a …