High-quality haplotype-resolved genome assembly of cultivated octoploid strawberry

J Mao, Y Wang, B Wang, J Li, C Zhang… - Horticulture …, 2023 - academic.oup.com
Cultivated strawberry (Fragaria× ananassa), a perennial herb belonging to the family
Rosaceae, is a complex octoploid with high heterozygosity at most loci. However, there is no …

[HTML][HTML] Genome-wide artificial introgressions of Gossypium barbadense into G. hirsutum reveal superior loci for simultaneous improvement of cotton fiber quality and …

S Li, L Kong, X Xiao, P Li, A Liu, J Li, J Gong… - Journal of Advanced …, 2023 - Elsevier
Introduction The simultaneous improvement of fiber quality and yield for cotton is strongly
limited by the narrow genetic backgrounds of Gossypium hirsutum (Gh) and the negative …

Both male and female meiosis contribute to non‐Mendelian inheritance of parental chromosomes in interspecific plant hybrids (Lolium × Festuca)

J Majka, M Glombik, A Doležalová, J Kneřová… - New …, 2023 - Wiley Online Library
Some interspecific plant hybrids show unequal transmission of chromosomes from parental
genomes to the successive generations. It has been suggested that this is due to a …

[HTML][HTML] Uniparental expression of ribosomal RNA in ×Festulolium grasses: a link between the genome and nucleolar dominance

V Mahelka, D Kopecký, J Majka, K Krak - Frontiers in Plant Science, 2023 - frontiersin.org
Genome or genomic dominance (GD) is a phenomenon observed in hybrids when one
parental genome becomes dominant over the other. It is manifested by the replacement of …

Genomic asymmetric epigenetic modification of transposable elements is involved in gene expression regulation of allopolyploid Brassica napus

Y Xiao, Z Xi, F Wang, J Wang - The Plant Journal, 2024 - Wiley Online Library
Polyploids are common and have a wide geographical distribution and environmental
adaptability. Allopolyploidy may lead to the activation of transposable elements (TE) …

Cytonuclear interplay in auto‐ and allopolyploids: a multifaceted perspective from the Festuca‐Lolium complex

M Shahbazi, J Majka, D Kubíková… - The Plant …, 2024 - Wiley Online Library
Restoring cytonuclear stoichiometry is necessary after whole‐genome duplication (WGD)
and interspecific/intergeneric hybridization in plants. We investigated this phenomenon in …

Investigation of regulatory divergence between homoeologs in the recently formed allopolyploids, Tragopogon mirus and T. miscellus (Asteraceae)

MJ Yoo, J Koh, JL Boatwright, DE Soltis… - The Plant …, 2024 - Wiley Online Library
Polyploidy is an important evolutionary process throughout eukaryotes, particularly in
flowering plants. Duplicated gene pairs (homoeologs) in allopolyploids provide additional …

[HTML][HTML] Genome Dominance in Allium Hybrids (A. cepa × A. roylei)

D Kopecký, O Scholten, J Majka… - Frontiers in Plant …, 2022 - frontiersin.org
Genome dominance is a phenomenon in wide hybrids when one of the parental genomes
becomes “dominant,” while the other genome turns to be “submissive.” This dominance may …

[HTML][HTML] Subgenome evolutionary dynamics in allotetraploid ferns: insights from the gene expression patterns in the allotetraploid species Phegopteris …

N Katayama, T Yamamoto, S Aiuchi… - Frontiers in Plant …, 2024 - frontiersin.org
Allopolyploidization often leads to disruptive conflicts among more than two sets of
subgenomes, leading to genomic modifications and changes in gene expression. Although …

Transcriptome shock in interspecific F1 allotriploid hybrids between Brassica species

C Quan, G Chen, S Li, Z Jia, P Yu, J Tu… - Journal of …, 2022 - academic.oup.com
Interspecific hybridization drives the evolution of angiosperms and can be used to introduce
novel alleles for important traits or to activate heterosis in crop breeding. Hybridization …