Machine learning-enabled retrobiosynthesis of molecules
Retrobiosynthesis provides an effective and sustainable approach to producing functional
molecules. The past few decades have witnessed a rapid expansion of biosynthetic …
molecules. The past few decades have witnessed a rapid expansion of biosynthetic …
[HTML][HTML] Artificial intelligence in pharmaceutical technology and drug delivery design
Artificial intelligence (AI) has emerged as a powerful tool that harnesses anthropomorphic
knowledge and provides expedited solutions to complex challenges. Remarkable …
knowledge and provides expedited solutions to complex challenges. Remarkable …
Diffusion models in bioinformatics and computational biology
Denoising diffusion models embody a type of generative artificial intelligence that can be
applied in computer vision, natural language processing and bioinformatics. In this Review …
applied in computer vision, natural language processing and bioinformatics. In this Review …
A large expert-curated cryo-EM image dataset for machine learning protein particle picking
Cryo-electron microscopy (cryo-EM) is a powerful technique for determining the structures of
biological macromolecular complexes. Picking single-protein particles from cryo-EM …
biological macromolecular complexes. Picking single-protein particles from cryo-EM …
In silico methods for identification of potential active sites of therapeutic targets
J Liao, Q Wang, F Wu, Z Huang - Molecules, 2022 - mdpi.com
Target identification is an important step in drug discovery, and computer-aided drug target
identification methods are attracting more attention compared with traditional drug target …
identification methods are attracting more attention compared with traditional drug target …
A fully differentiable ligand pose optimization framework guided by deep learning and a traditional scoring function
The recently reported machine learning-or deep learning-based scoring functions (SFs)
have shown exciting performance in predicting protein–ligand binding affinities with fruitful …
have shown exciting performance in predicting protein–ligand binding affinities with fruitful …
A survey on adversarial attacks for malware analysis
Machine learning has witnessed tremendous growth in its adoption and advancement in the
last decade. The evolution of machine learning from traditional algorithms to modern deep …
last decade. The evolution of machine learning from traditional algorithms to modern deep …
Deep learning-based bioactive therapeutic peptide generation and screening
H Zhang, KM Saravanan, Y Wei, Y Jiao… - Journal of Chemical …, 2023 - ACS Publications
Many bioactive peptides demonstrated therapeutic effects over complicated diseases, such
as antiviral, antibacterial, anticancer, etc. It is possible to generate a large number of …
as antiviral, antibacterial, anticancer, etc. It is possible to generate a large number of …
NHGNN-DTA: a node-adaptive hybrid graph neural network for interpretable drug–target binding affinity prediction
H He, G Chen, CYC Chen - Bioinformatics, 2023 - academic.oup.com
Motivation Large-scale prediction of drug–target affinity (DTA) plays an important role in
drug discovery. In recent years, machine learning algorithms have made great progress in …
drug discovery. In recent years, machine learning algorithms have made great progress in …
Molecular docking in organic, inorganic, and hybrid systems: A tutorial review
M Mohanty, PS Mohanty - Monatshefte für Chemie-Chemical Monthly, 2023 - Springer
Molecular docking simulation is a very popular and well-established computational
approach and has been extensively used to understand molecular interactions between a …
approach and has been extensively used to understand molecular interactions between a …