The Role of AI in Drug Discovery

M Abbas, A Rassam, R Abunora, F Karamshahi… - …, 2024 - Wiley Online Library
The emergence of Artificial Intelligence (AI) in drug discovery marks a pivotal shift in
pharmaceutical research, blending sophisticated computational techniques with …

Deep Learning for Protein-Ligand Docking: Are We There Yet?

A Morehead, N Giri, J Liu, J Cheng - arXiv preprint arXiv:2405.14108, 2024 - arxiv.org
The effects of ligand binding on protein structures and their in vivo functions carry numerous
implications for modern biomedical research and biotechnology development efforts such as …

Graph Representation Learning for Interactive Biomolecule Systems

X Xiong, B Zhou, YG Wang - arXiv preprint arXiv:2304.02656, 2023 - arxiv.org
Advances in deep learning models have revolutionized the study of biomolecule systems
and their mechanisms. Graph representation learning, in particular, is important for …

AI-based prediction of protein–ligand binding affinity and discovery of potential natural product inhibitors against ERK2

R Yang, L Zhang, F Bu, F Sun, B Cheng - BMC chemistry, 2024 - Springer
Determination of protein–ligand binding affinity (PLA) is a key technological tool in hit
discovery and lead optimization, which is critical to the drug development process. PLA can …

Phytochemical constituents analysis in laminaria digitata for Alzheimer's disease: molecular docking and in-silico toxicity approach

AD Adella Putri, MH Sembiring… - … & Integrative Biology, 2024 - Taylor & Francis
Alzheimer's disease (AD) is a common brain disease associated with cognitive impairment
and dementia. donepezil, an acetylcholinesterase (AChE) inhibitor drug as a commercial AD …

LMNglyPred: prediction of human N-linked glycosylation sites using embeddings from a pre-trained protein language model

SC Pakhrin, S Pokharel, KF Aoki-Kinoshita… - …, 2023 - academic.oup.com
Protein N-linked glycosylation is an important post-translational mechanism in Homo
sapiens, playing essential roles in many vital biological processes. It occurs at the NX-[S/T] …

Artificial Intelligence‐Powered Molecular Docking: A Promising Tool for Rational Drug Design

NK Borah, Y Tripathi, A Tanwar, D Tiwari… - … Machine Learning in …, 2024 - Wiley Online Library
Molecular docking is a vital computational method for predicting how small molecules bind
to target proteins, aiding drug discovery. It involves screening vast small molecule …

[HTML][HTML] AI's Role in Pharmaceuticals: Assisting Drug Design from Protein Interactions to Drug Development

S Bechelli, J Delhommelle - Artificial Intelligence Chemistry, 2023 - Elsevier
Developing new pharmaceutical compounds is a lengthy, costly, and intensive process. In
recent years, the development of Artificial Intelligence (AI), Machine Learning (ML), and …

AI Models for Biopharmaceutical Property Prediction

B Yingngam - Artificial Intelligence and Machine Learning in …, 2024 - Wiley Online Library
Accurate and reliable prediction of drug properties is crucial in the biopharmaceutical
industry because they directly impact drug efficacy and safety. However, the traditional …

Deep Learning for the Structure‐Based Binding Free Energy Prediction of Small Molecule Ligands

V Mysore, N Patel, A Ojewole - Computational Drug Discovery …, 2024 - Wiley Online Library
Predicting protein–ligand binding affinity or free energy can save time and resources in drug
discovery and development by helping to predict new drug candidates and better …