Teratozoospermia: spotlight on the main genetic actors in the human

C Coutton, J Escoffier, G Martinez… - Human reproduction …, 2015 - academic.oup.com
BACKGROUND Male infertility affects> 20 million men worldwide and represents a major
health concern. Although multifactorial, male infertility has a strong genetic basis which has …

Chronic kidney disease influences multiple systems: describing the relationship between oxidative stress, inflammation, kidney damage, and concomitant disease

PS Tucker, AT Scanlan, VJ Dalbo - Oxidative medicine and …, 2015 - Wiley Online Library
Chronic kidney disease (CKD) is characterized by increased levels of oxidative stress and
inflammation. Oxidative stress and inflammation promote renal injury via damage to …

[HTML][HTML] Cigarette smoke exposure and inflammatory signaling increase the expression of the SARS-CoV-2 receptor ACE2 in the respiratory tract

JC Smith, EL Sausville, V Girish, ML Yuan… - Developmental cell, 2020 - cell.com
The factors mediating fatal SARS-CoV-2 infections are poorly understood. Here, we show
that cigarette smoke causes a dose-dependent upregulation of angiotensin converting …

A high resolution map of the Arabidopsis thaliana developmental transcriptome based on RNA‐seq profiling

AV Klepikova, AS Kasianov, ES Gerasimov… - The Plant …, 2016 - Wiley Online Library
Arabidopsis thaliana is a long established model species for plant molecular biology,
genetics and genomics, and studies of A. thaliana gene function provide the basis for …

JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom

A Sreedasyam, C Plott, MS Hossain… - Nucleic acids …, 2023 - academic.oup.com
Gene functional descriptions offer a crucial line of evidence for candidate genes underlying
trait variation. Conversely, plant responses to environmental cues represent important …

[HTML][HTML] Landscape of adenosine-to-inosine RNA recoding across human tissues

O Gabay, Y Shoshan, E Kopel, U Ben-Zvi… - Nature …, 2022 - nature.com
RNA editing by adenosine deaminases changes the information encoded in the mRNA from
its genomic blueprint. Editing of protein-coding sequences can introduce novel, functionally …

Neural circular RNAs are derived from synaptic genes and regulated by development and plasticity

X You, I Vlatkovic, A Babic, T Will, I Epstein… - Nature …, 2015 - nature.com
Circular RNAs (circRNAs) have re-emerged as an interesting RNA species. Using deep
RNA profiling in different mouse tissues, we observed that circRNAs were substantially …

A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium

Nature biotechnology, 2014 - nature.com
We present primary results from the Sequencing Quality Control (SEQC) project,
coordinated by the US Food and Drug Administration. Examining Illumina HiSeq, Life …

The metabolome regulates the epigenetic landscape during naive-to-primed human embryonic stem cell transition

H Sperber, J Mathieu, Y Wang, A Ferreccio… - Nature cell …, 2015 - nature.com
For nearly a century developmental biologists have recognized that cells from embryos can
differ in their potential to differentiate into distinct cell types. Recently, it has been recognized …

Remodeling of epigenome and transcriptome landscapes with aging in mice reveals widespread induction of inflammatory responses

BA Benayoun, EA Pollina, PP Singh… - Genome …, 2019 - genome.cshlp.org
Aging is accompanied by the functional decline of tissues. However, a systematic study of
epigenomic and transcriptomic changes across tissues during aging is missing. Here, we …