Cell dormancy plasticity: quiescence deepens into senescence through a dimmer switch

K Fujimaki, G Yao - Physiological genomics, 2020 - journals.physiology.org
Both being dormant cellular states, quiescence and senescence are traditionally considered
distinct. Quiescence is reversible to proliferation upon growth signals, whereas senescence …

TransOrGAN: an artificial intelligence mapping of rat transcriptomic profiles between organs, ages, and sexes

T Li, R Roberts, Z Liu, W Tong - Chemical Research in Toxicology, 2023 - ACS Publications
Animal studies are required for the evaluation of candidate drugs to ensure patient and
volunteer safety. Toxicogenomics is often applied in these studies to gain understanding of …

Integrating transcriptomic and proteomic data for accurate assembly and annotation of genomes

TSK Prasad, AK Mohanty, M Kumar… - Genome …, 2017 - genome.cshlp.org
Complementing genome sequence with deep transcriptome and proteome data could
enable more accurate assembly and annotation of newly sequenced genomes. Here, we …

The developmental origins of sex-biased expression in cardiac development

DF Deegan, R Karbalaei, J Madzo, RJ Kulathinal… - Biology of sex …, 2019 - Springer
Background Expression patterns between males and females vary in every adult tissue,
even in organs with no conspicuous dimorphisms such as the heart. While studies of male …

GPCRs direct germline development and somatic gonad function in planarians

A Saberi, A Jamal, I Beets, L Schoofs… - PLoS biology, 2016 - journals.plos.org
Planarians display remarkable plasticity in maintenance of their germline, with the ability to
develop or dismantle reproductive tissues in response to systemic and environmental cues …

Comparative transcriptome analysis reveals potentially novel roles of Homeobox genes in adipose deposition in fat-tailed sheep

D Kang, G Zhou, S Zhou, J Zeng, X Wang, Y Jiang… - Scientific reports, 2017 - nature.com
Adipose tissues are phenotypically, metabolically and functionally heterogeneous based on
the sites of their deposition. Undesirable fat deposits in the body are often detrimental to …

The HVCN1 voltage‐gated proton channel contributes to pH regulation in canine ventricular myocytes

J Ma, X Gao, Y Li, TE DeCoursey… - The Journal of …, 2022 - Wiley Online Library
Regulation of intracellular pH (pHi) in cardiomyocytes is crucial for cardiac function;
however, currently known mechanisms for direct or indirect extrusion of acid from …

Bioinformatics tools for lncRNA research

J Iwakiri, M Hamada, K Asai - Biochimica et Biophysica Acta (BBA)-Gene …, 2016 - Elsevier
Current experimental methods to identify the functions of a large number of the candidates of
long non-coding RNAs (lncRNAs) are limited in their throughput. Therefore, it is essential to …

Up-regulation of miR-325-3p suppresses pineal aralkylamine N-acetyltransferase (Aanat) after neonatal hypoxia–ischemia brain injury in rats

Y Yang, B Sun, J Huang, L Xu, J Pan, C Fang, M Li… - Brain research, 2017 - Elsevier
Survivors of hypoxic-ischemic brain damage (HIBD), besides impairment of psychomotor
development, often develop circadian rhythm disorders, although the underlying …

Selenoprotein TXNRD3 supports male fertility via the redox regulation of spermatogenesis

Q Dou, AA Turanov, M Mariotti, JY Hwang… - Journal of Biological …, 2022 - ASBMB
Thioredoxin/glutathione reductase (TXNRD3) is a selenoprotein composed of thioredoxin
reductase and glutaredoxin domains. This NADPH-dependent thiol oxidoreductase evolved …