Genomics of plant speciation

DG Bock, Z Cai, C Elphinstone… - Plant …, 2023 - cell.com
Studies of plants have been instrumental for revealing how new species originate. For
several decades, botanical research has complemented and, in some cases, challenged …

Novel approaches for species concepts and delimitation in polyploids and hybrids

E Hörandl - Plants, 2022 - mdpi.com
Hybridization and polyploidization are important processes for plant evolution. However,
classification of hybrid or polyploid species has been notoriously difficult because of the …

A plastid phylogenomic framework for the palm family (Arecaceae)

G Yao, YQ Zhang, C Barrett, B Xue, S Bellot, WJ Baker… - BMC biology, 2023 - Springer
Background Over the past decade, phylogenomics has greatly advanced our knowledge of
angiosperm evolution. However, phylogenomic studies of large angiosperm families with …

Untying Gordian knots: unraveling reticulate polyploid plant evolution by genomic data using the large Ranunculus auricomus species complex

K Karbstein, S Tomasello, L Hodač, N Wagner… - New …, 2022 - Wiley Online Library
Speciation via hybridization and polyploidization is a major evolutionary force in plant
evolution but is still poorly understood for neopolyploid groups. Challenges are attributed to …

Exploring Angiosperms353: An open, community toolkit for collaborative phylogenomic research on flowering plants

WJ Baker, S Dodsworth, F Forest, SW Graham… - 2021 - ttu-ir.tdl.org
The unveiling of the angiosperm (flowering plant) tree of life over the past three decades has
been one of the great success stories of modern plant biology. Flowering plants underpin …

Analysis of Paralogs in Target Enrichment Data Pinpoints Multiple Ancient Polyploidy Events in Alchemilla sl (Rosaceae)

DF Morales-Briones, B Gehrke, CH Huang… - Systematic …, 2022 - academic.oup.com
Target enrichment is becoming increasingly popular for phylogenomic studies. Although
baits for enrichment are typically designed to target single-copy genes, paralogs are often …

Geometric morphometric versus genomic patterns in a large polyploid plant species complex

L Hodač, K Karbstein, S Tomasello, J Wäldchen… - Biology, 2023 - mdpi.com
Simple Summary Plant species complexes with hybridization and asexual reproduction
often exhibit complex morphological patterns, which is problematic for classifications. Here …

Identifying and addressing methodological incongruence in phylogenomics: A review

JF Fleming, A Valero‐Gracia… - Evolutionary …, 2023 - Wiley Online Library
The availability of phylogenetic data has greatly expanded in recent years. As a result, a
new era in phylogenetic analysis is dawning—one in which the methods we use to analyse …

The importance of considering the evolutionary history of polyploids when assessing climatic niche evolution

N Padilla‐García, G Šrámková, E Záveská… - Journal of …, 2023 - Wiley Online Library
Aim Although whole‐genome duplication (WGD) is an important speciation force, we still
lack a consensus on the role of niche differentiation in polyploid evolution. In addition, the …

Unveiling the Patterns of Reticulated Evolutionary Processes with Phylogenomics: Hybridization and Polyploidy in the Genus Rosa

K Debray, MC Le Paslier, A Bérard… - Systematic …, 2022 - academic.oup.com
Reticulation, caused by hybridization and allopolyploidization, is considered an important
and frequent phenomenon in the evolution of numerous plant lineages. Although both …