DNA demethylation pathways: additional players and regulators
M Bochtler, A Kolano, GL Xu - Bioessays, 2017 - Wiley Online Library
DNA demethylation can occur passively by “dilution” of methylation marks by DNA
replication, or actively and independently of DNA replication. Direct conversion of 5 …
replication, or actively and independently of DNA replication. Direct conversion of 5 …
Role of base excision repair in maintaining the genetic and epigenetic integrity of CpG sites
A Bellacosa, AC Drohat - DNA repair, 2015 - Elsevier
Cytosine methylation at CpG dinucleotides is a central component of epigenetic regulation
in vertebrates, and the base excision repair (BER) pathway is important for maintaining both …
in vertebrates, and the base excision repair (BER) pathway is important for maintaining both …
Biochemical reconstitution of TET1–TDG–BER-dependent active DNA demethylation reveals a highly coordinated mechanism
AR Weber, C Krawczyk, AB Robertson… - Nature …, 2016 - nature.com
Cytosine methylation in CpG dinucleotides is an epigenetic DNA modification dynamically
established and maintained by DNA methyltransferases and demethylases. Molecular …
established and maintained by DNA methyltransferases and demethylases. Molecular …
Tet3 reads 5-carboxylcytosine through its CXXC domain and is a potential guardian against neurodegeneration
We report that the mammalian 5-methylcytosine (5mC) oxidase Tet3 exists as three major
isoforms and characterized the full-length isoform containing an N-terminal CXXC domain …
isoforms and characterized the full-length isoform containing an N-terminal CXXC domain …
Divergent mechanisms for enzymatic excision of 5-formylcytosine and 5-carboxylcytosine from DNA
A Maiti, AZ Michelson, CJ Armwood… - Journal of the …, 2013 - ACS Publications
5-Methylcytosine (mC) is an epigenetic mark that impacts transcription, development, and
genome stability, and aberrant DNA methylation contributes to aging and cancer. Active …
genome stability, and aberrant DNA methylation contributes to aging and cancer. Active …
Protein interactions at oxidized 5-methylcytosine bases
Methylcytosine (5mC), the major modified DNA base in mammalian cells, can be oxidized
enzymatically to 5-hydroxymethylcytosine (5hmC), 5-formylcytosine (5fC), and 5 …
enzymatically to 5-hydroxymethylcytosine (5hmC), 5-formylcytosine (5fC), and 5 …
Are there specific readers of oxidized 5‐methylcytosine bases?
J Song, GP Pfeifer - Bioessays, 2016 - Wiley Online Library
5‐methylcytosine (5mC) was long thought to be the only enzymatically created modified
DNA base in mammalian cells. The discovery of 5‐hydroxymethylcytosine, 5‐formylcytosine …
DNA base in mammalian cells. The discovery of 5‐hydroxymethylcytosine, 5‐formylcytosine …
Excision of 5-carboxylcytosine by thymine DNA glycosylase
5-Methylcytosine (mC) is an epigenetic mark that is written by methyltransferases, erased
through passive and active mechanisms, and impacts transcription, development, diseases …
through passive and active mechanisms, and impacts transcription, development, diseases …
Preferential CEBP binding to T: G mismatches and increased C-to-T human somatic mutations
DNA cytosine methylation in mammals modulates gene expression and chromatin
accessibility. It also impacts mutation rates, via spontaneous oxidative deamination of 5 …
accessibility. It also impacts mutation rates, via spontaneous oxidative deamination of 5 …
Thymine DNA glycosylase exhibits negligible affinity for nucleobases that it removes from DNA
SS Malik, CT Coey, KM Varney… - Nucleic Acids …, 2015 - academic.oup.com
Abstract Thymine DNA Glycosylase (TDG) performs essential functions in maintaining
genetic integrity and epigenetic regulation. Initiating base excision repair, TDG removes …
genetic integrity and epigenetic regulation. Initiating base excision repair, TDG removes …