De novo domestication: an alternative route toward new crops for the future

AR Fernie, J Yan - Molecular plant, 2019 - cell.com
Current global agricultural production must feed over 7 billion people. However, productivity
varies greatly across the globe and is under threat from both increased competitions for land …

The integrated genomics of crop domestication and breeding

X Huang, S Huang, B Han, J Li - Cell, 2022 - cell.com
As a major event in human civilization, wild plants were successfully domesticated to be
crops, largely owing to continuing artificial selection. Here, we summarize new discoveries …

Dual domestications and origin of traits in grapevine evolution

Y Dong, S Duan, Q Xia, Z Liang, X Dong, K Margaryan… - Science, 2023 - science.org
We elucidate grapevine evolution and domestication histories with 3525 cultivated and wild
accessions worldwide. In the Pleistocene, harsh climate drove the separation of wild grape …

The complete reference genome for grapevine (Vitis vinifera L.) genetics and breeding

X Shi, S Cao, X Wang, S Huang, Y Wang… - Horticulture …, 2023 - academic.oup.com
Grapevine is one of the most economically important crops worldwide. However, the
previous versions of the grapevine reference genome tipically consist of thousands of …

Phased diploid genome assemblies and pan-genomes provide insights into the genetic history of apple domestication

X Sun, C Jiao, H Schwaninger, CT Chao, Y Ma… - Nature …, 2020 - nature.com
Domestication of the apple was mainly driven by interspecific hybridization. In the present
study, we report the haplotype-resolved genomes of the cultivated apple (Malus domestica …

863 genomes reveal the origin and domestication of chicken

MS Wang, M Thakur, MS Peng, YU Jiang, LAF Frantz… - Cell research, 2020 - nature.com
Despite the substantial role that chickens have played in human societies across the world,
both the geographic and temporal origins of their domestication remain controversial. To …

Genome assembly of wild tea tree DASZ reveals pedigree and selection history of tea varieties

W Zhang, Y Zhang, H Qiu, Y Guo, H Wan… - Nature …, 2020 - nature.com
Wild teas are valuable genetic resources for studying domestication and breeding. Here we
report the assembly of a high-quality chromosome-scale reference genome for an ancient …

The population genetics of structural variants in grapevine domestication

Y Zhou, A Minio, M Massonnet, E Solares, Y Lv… - Nature plants, 2019 - nature.com
Structural variants (SVs) are a largely unexplored feature of plant genomes. Little is known
about the type and size of SVs, their distribution among individuals and, especially, their …

[HTML][HTML] Evolutionary insights into the nature of plant domestication

MD Purugganan - Current Biology, 2019 - cell.com
Domestication is a co-evolutionary process that occurs when wild plants are brought into
cultivation by humans, leading to origin of new species and/or differentiated populations that …

Adaptive and maladaptive introgression in grapevine domestication

H Xiao, Z Liu, N Wang, Q Long, S Cao… - Proceedings of the …, 2023 - National Acad Sciences
Domesticated grapevines spread to Europe around 3,000 years ago. Previous studies have
revealed genomic signals of introgression from wild to cultivated grapes in Europe, but the …