[HTML][HTML] Before and after AlphaFold2: An overview of protein structure prediction

LMF Bertoline, AN Lima, JE Krieger… - Frontiers in …, 2023 - frontiersin.org
Three-dimensional protein structure is directly correlated with its function and its
determination is critical to understanding biological processes and addressing human …

Recent advances in simultaneous thermostability-activity improvement of industrial enzymes through structure modification

NG Nezhad, RNZR Abd Rahman, YM Normi… - International journal of …, 2023 - Elsevier
Engineered thermostable microbial enzymes are widely employed to catalyze chemical
reactions in numerous industrial sectors. Although high thermostability is a prerequisite of …

[PDF][PDF] Enhanced neutralization resistance of SARS-CoV-2 omicron subvariants BQ. 1, BQ. 1.1, BA. 4.6, BF. 7, and BA. 2.75. 2

P Qu, JP Evans, JN Faraone, YM Zheng, C Carlin… - Cell host & …, 2023 - cell.com
The continued evolution of SARS-CoV-2 has led to the emergence of several new Omicron
subvariants, including BQ. 1, BQ. 1.1, BA. 4.6, BF. 7, and BA. 2.75. 2. Here, we examine the …

Generalized biomolecular modeling and design with RoseTTAFold All-Atom

R Krishna, J Wang, W Ahern, P Sturmfels, P Venkatesh… - Science, 2024 - science.org
Deep-learning methods have revolutionized protein structure prediction and design but are
presently limited to protein-only systems. We describe RoseTTAFold All-Atom (RFAA), which …

[PDF][PDF] Enhanced evasion of neutralizing antibody response by Omicron XBB. 1.5, CH. 1.1, and CA. 3.1 variants

P Qu, JN Faraone, JP Evans, YM Zheng, C Carlin… - Cell reports, 2023 - cell.com
Omicron subvariants continuingly challenge current vaccination strategies. Here, we
demonstrate nearly complete escape of the XBB. 1.5, CH. 1.1, and CA. 3.1 variants from …

[PDF][PDF] Evasion of neutralizing antibody responses by the SARS-CoV-2 BA. 2.75 variant

P Qu, JP Evans, YM Zheng, C Carlin, LJ Saif, EM Oltz… - Cell host & …, 2022 - cell.com
Summary The newly emerged BA. 2.75 severe acute respiratory syndrome coronavirus 2
(SARS-CoV-2) variant contains 9 additional mutations in its spike (S) protein compared to …

[HTML][HTML] Tuning charge density of chimeric antigen receptor optimizes tonic signaling and CAR-T cell fitness

J Chen, S Qiu, W Li, K Wang, Y Zhang, H Yang, B Liu… - Cell Research, 2023 - nature.com
Tonic signaling of chimeric antigen receptor (CAR), ie, the spontaneous CAR activation in
the absence of tumor antigen stimulation, is considered to be a pivotal event controlling CAR …

[HTML][HTML] Molecular docking study of potential phytochemicals and their effects on the complex of SARS-CoV2 spike protein and human ACE2

A Basu, A Sarkar, U Maulik - Scientific reports, 2020 - nature.com
Abstract Angiotensin converting enzyme 2 (ACE2)(EC: 3.4. 17.23) is a transmembrane
protein which is considered as a receptor for spike protein binding of novel coronavirus …

[HTML][HTML] Cryo-EM structure of the respiratory I + III2 supercomplex from Arabidopsis thaliana at 2 Å resolution

N Klusch, M Dreimann, J Senkler, N Rugen… - Nature Plants, 2023 - nature.com
Protein complexes of the mitochondrial respiratory chain assemble into respiratory
supercomplexes. Here we present the high-resolution electron cryo-microscopy structure of …

[PDF][PDF] The molecular basis for sarcomere organization in vertebrate skeletal muscle

Z Wang, M Grange, T Wagner, AL Kho, M Gautel… - Cell, 2021 - cell.com
Sarcomeres are force-generating and load-bearing devices of muscles. A precise molecular
picture of how sarcomeres are built underpins understanding their role in health and …