Machine learning and decision support in critical care

AEW Johnson, MM Ghassemi, S Nemati… - Proceedings of the …, 2016 - ieeexplore.ieee.org
Clinical data management systems typically provide caregiver teams with useful information,
derived from large, sometimes highly heterogeneous, data sources that are often changing …

Artificial intelligence and machine learning assisted drug delivery for effective treatment of infectious diseases

S He, LG Leanse, Y Feng - Advanced drug delivery reviews, 2021 - Elsevier
In the era of antimicrobial resistance, the prevalence of multidrug-resistant microorganisms
that resist conventional antibiotic treatment has steadily increased. Thus, it is now …

Clinical metagenomic sequencing for diagnosis of meningitis and encephalitis

MR Wilson, HA Sample, KC Zorn… - … England Journal of …, 2019 - Mass Medical Soc
Background Metagenomic next-generation sequencing (NGS) of cerebrospinal fluid (CSF)
has the potential to identify a broad range of pathogens in a single test. Methods In a 1-year …

Brain microglia serve as a persistent HIV reservoir despite durable antiretroviral therapy

Y Tang, A Chaillon, S Gianella… - The Journal of …, 2023 - Am Soc Clin Investig
Brain microglia (MG) may serve as a human immunodeficiency virus 1 (HIV) reservoir and
ignite rebound viremia following cessation of antiretroviral therapy (ART), but they have yet …

HIV persists throughout deep tissues with repopulation from multiple anatomical sources

A Chaillon, S Gianella, S Dellicour… - The Journal of …, 2020 - Am Soc Clin Investig
BACKGROUND Understanding HIV dynamics across the human body is important for cure
efforts. This goal has been hampered by technical difficulties and the challenge of obtaining …

ROCR: visualizing classifier performance in R

T Sing, O Sander, N Beerenwinkel, T Lengauer - Bioinformatics, 2005 - academic.oup.com
ROCR is a package for evaluating and visualizing the performance of scoring classifiers in
the statistical language R. It features over 25 performance measures that can be freely …

[HTML][HTML] Automated subtyping of HIV-1 genetic sequences for clinical and surveillance purposes: performance evaluation of the new REGA version 3 and seven other …

AC Pineda-Peña, NR Faria, S Imbrechts, P Libin… - Infection, genetics and …, 2013 - Elsevier
Background To investigate differences in pathogenesis, diagnosis and resistance pathways
between HIV-1 subtypes, an accurate subtyping tool for large datasets is needed. We aimed …

Transcriptional reprogramming during effector-to-memory transition renders CD4+ T cells permissive for latent HIV-1 infection

L Shan, K Deng, H Gao, S Xing, AA Capoferri… - Immunity, 2017 - cell.com
The latent reservoir for HIV-1 in resting memory CD4+ T cells is the major barrier to curing
HIV-1 infection. Studies of HIV-1 latency have focused on regulation of viral gene expression …

[图书][B] Kernel methods in computational biology

B Schölkopf, K Tsuda, JP Vert - 2004 - books.google.com
A detailed overview of current research in kernel methods and their application to
computational biology. Modern machine learning techniques are proving to be extremely …

Web resources for HIV type 1 genotypic-resistance test interpretation

TF Liu, RW Shafer - Clinical infectious diseases, 2006 - academic.oup.com
Interpreting the results of plasma human immunodeficiency virus type 1 (HIV-1) genotypic
drug-resistance tests is one of the most difficult tasks facing clinicians caring for HIV-1 …