Influence of Polycyclic Aromatic Compounds and Oxidation States of Soot Organics on the Metabolome of Human-Lung Cells (A549): Implications for Vehicle Fuel …

L Wang, W Wen, J Yan, R Zhang, C Li… - Environmental …, 2023 - ACS Publications
Decades of research have established the toxicity of soot particles resulting from incomplete
combustion. However, the unique chemical compounds responsible for adverse health …

[HTML][HTML] On the epigenetic role of guanosine oxidation

M Giorgio, GI Dellino, V Gambino, PG Pelicci - Redox Biology, 2020 - Elsevier
Chemical modifications of DNA and RNA regulate genome functions or trigger mutagenesis
resulting in aging or cancer. Oxidations of macromolecules, including DNA, are common …

The many virtues of tRNA-derived stress-induced RNAs (tiRNAs): discovering novel mechanisms of stress response and effect on human health

M Saikia, M Hatzoglou - Journal of Biological Chemistry, 2015 - ASBMB
In mammalian cells, mature tRNAs are cleaved by stress-activated ribonuclease angiogenin
to generate 5′-and 3′-tRNA halves: a novel class of small non-coding RNAs of 30–40 …

[HTML][HTML] tRNA-derived fragments (tRFs) regulate post-transcriptional gene expression via AGO-dependent mechanism in IL-1β stimulated chondrocytes

JA Green, MY Ansari, HC Ball, TM Haqqi - Osteoarthritis and cartilage, 2020 - Elsevier
Objectives Recent studies have shown that tRNA-derived RNA fragments (tRFs) are novel
regulators of post-transcriptional gene expression. However, the expression profiles and …

tRNA-derived short non-coding RNA as interacting partners of argonaute proteins

M Shigematsu, Y Kirino - Gene regulation and systems …, 2015 - journals.sagepub.com
The advent of next-generation sequencing technologies has not only accelerated findings
on various novel non-coding RNA (ncRNA) species but also led to the revision of the …

Immuno-northern blotting: detection of RNA modifications by using antibodies against modified nucleosides

E Mishima, D Jinno, Y Akiyama, K Itoh, S Nankumo… - PloS one, 2015 - journals.plos.org
The biological roles of RNA modifications are still largely not understood. Thus, developing
a method for detecting RNA modifications is important for further clarification. We developed …

A comprehensive overview of bull sperm-borne small non-coding RNAs and their diversity across breeds

E Sellem, S Marthey, A Rau, L Jouneau, A Bonnet… - Epigenetics & …, 2020 - Springer
Background Mature sperm carry thousands of RNAs, including mRNAs, lncRNAs, tRNAs,
rRNAs and sncRNAs, though their functional significance is still a matter of debate. Growing …

The tRNA regulome in neurodevelopmental and neuropsychiatric disease

J Blaze, S Akbarian - Molecular psychiatry, 2022 - nature.com
Abstract Transfer (t) RNAs are 70–90 nucleotide small RNAs highly regulated by 43 different
types of epitranscriptomic modifications and requiring aminoacylation ('charging') for mRNA …

Stress‐induced tRNA cleavage and tiRNA generation in rat neuronal PC12 cells

A Elkordy, E Mishima, K Niizuma… - Journal of …, 2018 - Wiley Online Library
Transfer RNA (tRNA) plays a role in stress response programs involved in various
pathological conditions including neurological diseases. Under cell stress conditions …

Identification of appropriate endogenous biomarker for risk assessment of multidrug and toxin extrusion protein‐mediated drug‐drug interactions in healthy volunteers

T Miyake, E Kimoto, L Luo… - Clinical …, 2021 - Wiley Online Library
Endogenous biomarkers are emerging to advance clinical drug‐drug interaction (DDI) risk
assessment in drug development. Twelve healthy subjects received a multidrug and toxin …