Polysaccharide utilization loci: fueling microbial communities
The complex carbohydrates of terrestrial and marine biomass represent a rich nutrient
source for free-living and mutualistic microbes alike. The enzymatic saccharification of these …
source for free-living and mutualistic microbes alike. The enzymatic saccharification of these …
[HTML][HTML] Fungal cellulases
Lignocellulosic biomass has enormous potential to contribute to worldwide energy,
chemical, and material demands in a renewable, sustainable manner. In the United States …
chemical, and material demands in a renewable, sustainable manner. In the United States …
dbCAN3: automated carbohydrate-active enzyme and substrate annotation
Carbohydrate active enzymes (CAZymes) are made by various organisms for complex
carbohydrate metabolism. Genome mining of CAZymes has become a routine data analysis …
carbohydrate metabolism. Genome mining of CAZymes has become a routine data analysis …
Diet-induced extinctions in the gut microbiota compound over generations
ED Sonnenburg, SA Smits, M Tikhonov… - Nature, 2016 - nature.com
The gut is home to trillions of microorganisms that have fundamental roles in many aspects
of human biology, including immune function and metabolism,. The reduced diversity of the …
of human biology, including immune function and metabolism,. The reduced diversity of the …
Bacteroidetes use thousands of enzyme combinations to break down glycans
P Lapébie, V Lombard, E Drula, N Terrapon… - Nature …, 2019 - nature.com
Unlike proteins, glycan chains are not directly encoded by DNA, but by the specificity of the
enzymes that assemble them. Theoretical calculations have proposed an astronomical …
enzymes that assemble them. Theoretical calculations have proposed an astronomical …
The carbohydrate-active enzymes database (CAZy) in 2013
V Lombard, H Golaconda Ramulu, E Drula… - Nucleic acids …, 2014 - academic.oup.com
Abstract The Carbohydrate-Active Enzymes database (CAZy; http://www. cazy. org) provides
online and continuously updated access to a sequence-based family classification linking …
online and continuously updated access to a sequence-based family classification linking …
Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes
A Levasseur, E Drula, V Lombard, PM Coutinho… - Biotechnology for …, 2013 - Springer
Background Since its inception, the carbohydrate-active enzymes database (CAZy;
http://www. cazy. org) has described the families of enzymes that cleave or build complex …
http://www. cazy. org) has described the families of enzymes that cleave or build complex …
Glycan complexity dictates microbial resource allocation in the large intestine
A Rogowski, JA Briggs, JC Mortimer, T Tryfona… - Nature …, 2015 - nature.com
The structure of the human gut microbiota is controlled primarily through the degradation of
complex dietary carbohydrates, but the extent to which carbohydrate breakdown products …
complex dietary carbohydrates, but the extent to which carbohydrate breakdown products …
Erratum to: comparative analysis of fungal genomes reveals different plant cell wall degrading capacity in fungi
The version of this article published in BMC Genomics 2013, 14: 274, contains 9
unpublished genomes (Botryobasidium botryosum, Gymnopus luxurians, Hypholoma …
unpublished genomes (Botryobasidium botryosum, Gymnopus luxurians, Hypholoma …
A discrete genetic locus confers xyloglucan metabolism in select human gut Bacteroidetes
A well-balanced human diet includes a significant intake of non-starch polysaccharides,
collectively termed 'dietary fibre', from the cell walls of diverse fruits and vegetables. Owing …
collectively termed 'dietary fibre', from the cell walls of diverse fruits and vegetables. Owing …