[HTML][HTML] Ecology and evolution of pine life histories

JE Keeley - Annals of Forest Science, 2012 - Springer
Pinus is a diverse genus of trees widely distributed throughout the Northern Hemisphere.
Understanding pine life history is critical to both conservation and fire management. Here I …

Evolution and biogeography of gymnosperms

XQ Wang, JH Ran - Molecular phylogenetics and evolution, 2014 - Elsevier
Living gymnosperms comprise only a little more than 1000 species, but represent four of the
five main lineages of seed plants, including cycads, ginkgos, gnetophytes and conifers. This …

Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies

DB Neale, JL Wegrzyn, KA Stevens, AV Zimin, D Puiu… - Genome biology, 2014 - Springer
Background The size and complexity of conifer genomes has, until now, prevented full
genome sequencing and assembly. The large research community and economic …

Biodiversity in the Mexican highlands and the interaction of geology, geography and climate within the Trans‐Mexican Volcanic Belt

A Mastretta‐Yanes, A Moreno‐Letelier… - Journal of …, 2015 - Wiley Online Library
Aim (1) To synthesize data on the physical and phylogeographical history of the Mexican
highlands, with a focus on the Trans‐Mexican Volcanic Belt (TMVB), and (2) to propose …

Increasing phylogenetic resolution at low taxonomic levels using massively parallel sequencing of chloroplast genomes

M Parks, R Cronn, A Liston - BMC biology, 2009 - Springer
Background Molecular evolutionary studies share the common goal of elucidating historical
relationships, and the common challenge of adequately sampling taxa and characters …

Contrasting rates of molecular evolution and patterns of selection among gymnosperms and flowering plants

AR De La Torre, Z Li, Y Van de Peer… - … biology and evolution, 2017 - academic.oup.com
The majority of variation in rates of molecular evolution among seed plants remains both
unexplored and unexplained. Although some attention has been given to flowering plants …

Sequence of the sugar pine megagenome

KA Stevens, JL Wegrzyn, A Zimin, D Puiu, M Crepeau… - Genetics, 2016 - academic.oup.com
Until very recently, complete characterization of the megagenomes of conifers has remained
elusive. The diploid genome of sugar pine (Pinus lambertiana Dougl.) has a highly …

Multiplex sequencing of plant chloroplast genomes using Solexa sequencing-by-synthesis technology

R Cronn, A Liston, M Parks, DS Gernandt… - Nucleic acids …, 2008 - academic.oup.com
Organellar DNA sequences are widely used in evolutionary and population genetic studies,
however, the conservative nature of chloroplast gene and genome evolution often limits …

Unique Features of the Loblolly Pine (Pinus taeda L.) Megagenome Revealed Through Sequence Annotation

JL Wegrzyn, JD Liechty, KA Stevens, LS Wu… - Genetics, 2014 - academic.oup.com
The largest genus in the conifer family Pinaceae is Pinus, with over 100 species. The size
and complexity of their genomes (∼ 20–40 Gb, 2 n= 24) have delayed the arrival of a well …

Fire‐adapted traits of Pinus arose in the fiery Cretaceous

T He, JG Pausas, CM Belcher, DW Schwilk… - New …, 2012 - Wiley Online Library
The mapping of functional traits onto chronograms is an emerging approach for the
identification of how agents of natural selection have shaped the evolution of organisms …