[HTML][HTML] A review of the pangenome: how it affects our understanding of genomic variation, selection and breeding in domestic animals?
Y Gong, Y Li, X Liu, Y Ma, L Jiang - Journal of Animal Science and …, 2023 - Springer
As large-scale genomic studies have progressed, it has been revealed that a single
reference genome pattern cannot represent genetic diversity at the species level. While …
reference genome pattern cannot represent genetic diversity at the species level. While …
Combining novel technologies with interdisciplinary basic research to enhance horticultural crops
X Jiang, W Zhang, AR Fernie, W Wen - The Plant Journal, 2022 - Wiley Online Library
Horticultural crops mainly include fruits, vegetables, ornamental trees and flowers, and tea
trees (Melaleuca alternifolia). They produce a variety of nutrients for the daily human diet in …
trees (Melaleuca alternifolia). They produce a variety of nutrients for the daily human diet in …
[HTML][HTML] Phylogenomic discovery of deleterious mutations facilitates hybrid potato breeding
Hybrid potato breeding will transform the crop from a clonally propagated tetraploid to a
seed-reproducing diploid. Historical accumulation of deleterious mutations in potato …
seed-reproducing diploid. Historical accumulation of deleterious mutations in potato …
Discovery of a DFR gene that controls anthocyanin accumulation in the spiny Solanum group: roles of a natural promoter variant and alternative splicing
X Wang, X Chen, S Luo, W Ma, N Li, W Zhang… - The Plant …, 2022 - Wiley Online Library
Anthocyanins are important pigments that impart color in plants. In Solanum, different
species display various fruit or flower colors due to varying degrees of anthocyanin …
species display various fruit or flower colors due to varying degrees of anthocyanin …
Tomato root specialized metabolites evolved through gene duplication and regulatory divergence within a biosynthetic gene cluster
Tremendous plant metabolic diversity arises from phylogenetically restricted specialized
metabolic pathways. Specialized metabolites are synthesized in dedicated cells or tissues …
metabolic pathways. Specialized metabolites are synthesized in dedicated cells or tissues …
[HTML][HTML] Exploring pan-genomes: an overview of resources and tools for unraveling structure, function, and evolution of crop genes and genomes
The availability of multiple sequenced genomes from a single species made it possible to
explore intra-and inter-specific genomic comparisons at higher resolution and build clade …
explore intra-and inter-specific genomic comparisons at higher resolution and build clade …
The effect of methodological considerations on the construction of gene-based plant pan-genomes
Pan-genomics is an emerging approach for studying the genetic diversity within plant
populations. In contrast to common resequencing studies that compare whole genome …
populations. In contrast to common resequencing studies that compare whole genome …
Conventional and new genetic resources for an eggplant breeding revolution
P Gramazio, D Alonso, A Arrones… - Journal of …, 2023 - academic.oup.com
Eggplant (Solanum melongena) is a major vegetable crop with great potential for genetic
improvement owing to its large and mostly untapped genetic diversity. It is closely related to …
improvement owing to its large and mostly untapped genetic diversity. It is closely related to …
[HTML][HTML] Chromosome-level genome assembly and annotation of the prickly nightshade Solanum rostratum Dunal
Y Zhang, W Guo, Z Yuan, Z Song, Z Wang, J Gao, W Fu… - Scientific Data, 2023 - nature.com
The prickly nightshade Solanum rostratum, an annual malignant weed, is native to North
America and has globally invaded 34 countries, causing serious threats to ecosystems …
America and has globally invaded 34 countries, causing serious threats to ecosystems …
[HTML][HTML] Mutations in the SmAPRR2 transcription factor suppressing chlorophyll pigmentation in the eggplant fruit peel are key drivers of a diversified colour palette
Understanding the mechanisms by which chlorophylls are synthesized in the eggplant
(Solanum melongena) fruit peel is of great relevance for eggplant breeding. A multi-parent …
(Solanum melongena) fruit peel is of great relevance for eggplant breeding. A multi-parent …