Prediction of effector protein structures from fungal phytopathogens enables evolutionary analyses
K Seong, KV Krasileva - Nature Microbiology, 2023 - nature.com
Elucidating the similarity and diversity of pathogen effectors is critical to understand their
evolution across fungal phytopathogens. However, rapid divergence that diminishes …
evolution across fungal phytopathogens. However, rapid divergence that diminishes …
Application of high-throughput sequencing technologies and analytical tools for pathogen detection in urban water systems: Progress and future perspectives
The ubiquitous presence of pathogenic microorganisms, such as viruses, bacteria, fungi,
and protozoa, in urban water systems poses a significant risk to public health. The …
and protozoa, in urban water systems poses a significant risk to public health. The …
The 2022 Nucleic Acids Research database issue and the online molecular biology database collection
DJ Rigden, XM Fernández - Nucleic acids research, 2022 - academic.oup.com
Abstract The 2022 Nucleic Acids Research Database Issue contains 185 papers, including
87 papers reporting on new databases and 85 updates from resources previously published …
87 papers reporting on new databases and 85 updates from resources previously published …
Integrated molecular and bioinformatics approaches for disease-related genes in plants
A Joshi, HG Song, SY Yang, JH Lee - Plants, 2023 - mdpi.com
Modern plant pathology relies on bioinformatics approaches to create novel plant disease
diagnostic tools. In recent years, a significant amount of biological data has been generated …
diagnostic tools. In recent years, a significant amount of biological data has been generated …
Genome-resolved metatranscriptomics reveals conserved root colonization determinants in a synthetic microbiota
The identification of processes activated by specific microbes during microbiota colonization
of plant roots has been hampered by technical constraints in metatranscriptomics. These …
of plant roots has been hampered by technical constraints in metatranscriptomics. These …
Ensembl 2024
PW Harrison, MR Amode… - Nucleic acids …, 2024 - academic.oup.com
Abstract Ensembl (https://www. ensembl. org) is a freely available genomic resource that has
produced high-quality annotations, tools, and services for vertebrates and model organisms …
produced high-quality annotations, tools, and services for vertebrates and model organisms …
Strategies for tailoring functional microbial synthetic communities
Natural ecosystems harbor a huge reservoir of taxonomically diverse microbes that are
important for plant growth and health. The vast diversity of soil microorganisms and their …
important for plant growth and health. The vast diversity of soil microorganisms and their …
Virulence factors of the genus Fusarium with targets in plants
A Gutiérrez-Sánchez, J Plasencia… - Microbiological …, 2023 - Elsevier
Fusarium spp. comprise various species of filamentous fungi that cause severe diseases in
plant crops of both agricultural and forestry interest. These plant pathogens produce a wide …
plant crops of both agricultural and forestry interest. These plant pathogens produce a wide …
[HTML][HTML] Protein network analysis and functional enrichment via computational biotechnology unravel molecular and pathogenic mechanisms of kidney stone disease
P Peerapen, V Thongboonkerd - biomedical journal, 2023 - Elsevier
Mass spectrometry-based proteomics has been extensively applied to current biomedical
research. From such large-scale identification of proteins, several computational tools have …
research. From such large-scale identification of proteins, several computational tools have …
Mobile genetic elements mediate the cross-media transmission of antibiotic resistance genes from pig farms and their risks
Z Yu, Z Liu, L Sun, C Dong, Y Jin, B Hu… - Science of The Total …, 2024 - Elsevier
Manure composting in traditional small-scale pig farms leads to the migration and diffusion
of antibiotics and antibiotics resistance genes (ARGs) along the chain of transmission to the …
of antibiotics and antibiotics resistance genes (ARGs) along the chain of transmission to the …