Phase separation provides a mechanism to drive phenotype switching

L Hong, Z Zhang, Z Wang, X Yu, J Zhang - Physical Review E, 2024 - APS
Phenotypic switching plays a crucial role in cell fate determination across various
organisms. Recent experimental findings highlight the significance of protein …

Deep learning linking mechanistic models to single-cell transcriptomics data reveals transcriptional bursting in response to DNA damage

Z Huang, S Luo, Z Wang, Z Zhang, B Jiang, Q Nie… - bioRxiv, 2024 - biorxiv.org
Cells must adopt flexible regulatory strategies to make decisions regarding their fate,
including differentiation, apoptosis, or survival in the face of various external stimuli. One key …

Neuronal phenotype defined by transcriptome-wide bursting kinetics in pyramidal and fast-spiking cells

V Tukacs, EK Fladhus, D Mittli, ML Lorincz, J Eberwine… - bioRxiv, 2024 - biorxiv.org
Single-cell sequencing revealed the transcriptional heterogeneity of neurons and introduced
transcriptome-defined neuron types and subtypes. Temporal recordings of gene …