Carbon catabolite repression in Pseudomonas: optimizing metabolic versatility and interactions with the environment

F Rojo - FEMS microbiology reviews, 2010 - academic.oup.com
Metabolically versatile free-living bacteria have global regulation systems that allow cells to
selectively assimilate a preferred compound among a mixture of several potential carbon …

Diversity, versatility and complexity of bacterial gene regulation mechanisms: opportunities and drawbacks for applications in synthetic biology

I Bervoets, D Charlier - FEMS microbiology reviews, 2019 - academic.oup.com
Gene expression occurs in two essential steps: transcription and translation. In bacteria, the
two processes are tightly coupled in time and space, and highly regulated. Tight regulation …

ppGpp: a global regulator in Escherichia coli

LU Magnusson, A Farewell, T Nyström - Trends in microbiology, 2005 - cell.com
The small nucleotide ppGpp acts as a global regulator of gene expression in bacteria.
Proteomic analysis of cells lacking ppGpp has shown that this nucleotide might affect many …

Revisiting the stringent response, ppGpp and starvation signaling

D Chatterji, AK Ojha - Current opinion in microbiology, 2001 - Elsevier
Microbial adaptation to environmental stress plays an important role in survival. It is
necessary to understand the mechanisms underlying the survival of microbes under stress …

Regulation of ς factor competition by the alarmone ppGpp

M Jishage, K Kvint, V Shingler… - Genes & …, 2002 - genesdev.cshlp.org
Many regulons controlled by alternative ς factors, including ςS and ς32, are poorly induced
in cells lacking the alarmone ppGpp. We show that ppGpp is not absolutely required for the …

[PDF][PDF] Nonmedical: pseudomonas

ERB Moore, BJ Tindall, VAP Martins Dos Santos… - The …, 2006 - researchgate.net
Pseudomonas comprises a genus of species capable of utilizing a wide range of organic
and inorganic compounds and of living under diverse environmental conditions …

MicroReview: Growth versus maintenance: a trade‐off dictated by RNA polymerase availability and sigma factor competition?

T Nyström - Molecular microbiology, 2004 - Wiley Online Library
The regulatory design of higher organisms is proposed to comprise a trade‐off between
activities devoted to reproduction and those devoted to cellular maintenance and repair …

Promoters in the environment: transcriptional regulation in its natural context

I Cases, V De Lorenzo - Nature Reviews Microbiology, 2005 - nature.com
Transcriptional activation of many bacterial promoters in their natural environment is not a
simple on/off decision. The expression of cognate genes is integrated in layers of iterative …

Regulatory roles of the bacterial nitrogen-related phosphotransferase system

K Pflüger-Grau, B Görke - Trends in microbiology, 2010 - cell.com
In addition to the sugar phosphotransferase system (sugar PTS) dedicated to carbohydrate
uptake, many Gram-negative bacteria possess a so-called nitrogen PTS (PTS Ntr). Although …

[HTML][HTML] The black cat/white cat principle of signal integration in bacterial promoters

I Cases, V de Lorenzo - The EMBO Journal, 2001 - embopress.org
Throughout the 3000 million years that bacteria have been on planet Earth, they have
evolved amazing mechanisms for rapid adaptation to every imaginable type of …