Diversity in global maize germplasm: characterization and utilization

BM Prasanna - Journal of biosciences, 2012 - Springer
Maize (Zea mays L.) is not only of worldwide importance as a food, feed and as a source of
diverse industrially important products, but is also a model genetic organism with immense …

GAPIT: genome association and prediction integrated tool

AE Lipka, F Tian, Q Wang, J Peiffer, M Li… - …, 2012 - academic.oup.com
Software programs that conduct genome-wide association studies and genomic prediction
and selection need to use methodologies that maximize statistical power, provide high …

[HTML][HTML] A SUPER powerful method for genome wide association study

Q Wang, F Tian, Y Pan, ES Buckler, Z Zhang - PloS one, 2014 - journals.plos.org
Genome-Wide Association Studies shed light on the identification of genes underlying
human diseases and agriculturally important traits. This potential has been shadowed by …

[HTML][HTML] Genetic characterization and linkage disequilibrium estimation of a global maize collection using SNP markers

J Yan, T Shah, ML Warburton, ES Buckler… - PloS one, 2009 - journals.plos.org
A newly developed maize Illumina GoldenGate Assay with 1536 SNPs from 582 loci was
used to genotype a highly diverse global maize collection of 632 inbred lines from …

Characterization of a global germplasm collection and its potential utilization for analysis of complex quantitative traits in maize

X Yang, S Gao, S Xu, Z Zhang, BM Prasanna, L Li… - Molecular …, 2011 - Springer
Association mapping is a powerful approach for exploring the molecular basis of phenotypic
variations in plants. A maize (Zea mays L.) association mapping panel including 527 inbred …

Genome-wide association mapping: a case study in bread wheat (Triticum aestivum L.)

K Neumann, B Kobiljski, S Denčić, RK Varshney… - Molecular …, 2011 - Springer
Association-based trait mapping is an innovative methodology based on linkage
disequilibrium. Studies in plants, especially in cereals, are rare. A genome-wide association …

[HTML][HTML] Population structure and genetic diversity in a commercial maize breeding program assessed with SSR and SNP markers

D Van Inghelandt, AE Melchinger, C Lebreton… - Theoretical and Applied …, 2010 - Springer
Abstract Information about the genetic diversity and population structure in elite breeding
material is of fundamental importance for the improvement of crops. The objectives of our …

Molecular characterization of global maize breeding germplasm based on genome-wide single nucleotide polymorphisms

Y Lu, J Yan, CT Guimaraes, S Taba, Z Hao… - Theoretical and applied …, 2009 - Springer
Abstract Characterization of genetic diversity is of great value to assist breeders in parental
line selection and breeding system design. We screened 770 maize inbred lines with 1,034 …

[HTML][HTML] Identification and validation of genomic regions influencing kernel zinc and iron in maize

V Hindu, N Palacios-Rojas, R Babu… - Theoretical and Applied …, 2018 - Springer
Key message Genome-wide association study (GWAS) on 923 maize lines and validation in
bi-parental populations identified significant genomic regions for kernel-Zinc and-Iron in …

Computer simulation in plant breeding

X Li, C Zhu, J Wang, J Yu - Advances in agronomy, 2012 - Elsevier
As a bridge between theory and experimentation, computer simulation has become a
powerful tool in scientific research, providing not only preliminary validation of theories but …