The impact of the Fungus-Host-Microbiota interplay upon Candida albicans infections: current knowledge and new perspectives

C d'Enfert, AK Kaune, LR Alaban… - FEMS microbiology …, 2021 - academic.oup.com
Candida albicans is a major fungal pathogen of humans. It exists as a commensal in the oral
cavity, gut or genital tract of most individuals, constrained by the local microbiota, epithelial …

Mycobiome diversity: high-throughput sequencing and identification of fungi

RH Nilsson, S Anslan, M Bahram… - Nature Reviews …, 2019 - nature.com
Fungi are major ecological players in both terrestrial and aquatic environments by cycling
organic matter and channelling nutrients across trophic levels. High-throughput sequencing …

[HTML][HTML] Patterns in soil microbial diversity across Europe

M Labouyrie, C Ballabio, F Romero, P Panagos… - Nature …, 2023 - nature.com
Factors driving microbial community composition and diversity are well established but the
relationship with microbial functioning is poorly understood, especially at large scales. We …

[HTML][HTML] Ecological memory of recurrent drought modifies soil processes via changes in soil microbial community

A Canarini, H Schmidt, L Fuchslueger, V Martin… - Nature …, 2021 - nature.com
Climate change is altering the frequency and severity of drought events. Recent evidence
indicates that drought may produce legacy effects on soil microbial communities. However, it …

Tracking, targeting, and conserving soil biodiversity

CA Guerra, RD Bardgett, L Caon, TW Crowther… - Science, 2021 - science.org
Nature conservation literature and policy instruments mainly focus on the impacts of human
development and the benefits of nature conservation for oceans and aboveground terrestrial …

Best practices in metabarcoding of fungi: from experimental design to results

L Tedersoo, M Bahram, L Zinger, RH Nilsson… - Molecular …, 2022 - Wiley Online Library
The development of high‐throughput sequencing (HTS) technologies has greatly improved
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …

High-throughput sequencing view on the magnitude of global fungal diversity

P Baldrian, T Větrovský, C Lepinay, P Kohout - Fungal Diversity, 2022 - Springer
High-throughput DNA sequencing has dramatically transformed several areas of biodiversity
research including mycology. Despite limitations, high-throughput sequencing is nowadays …

[HTML][HTML] The gut mycobiome of the Human Microbiome Project healthy cohort

AK Nash, TA Auchtung, MC Wong, DP Smith, JR Gesell… - Microbiome, 2017 - Springer
Background Most studies describing the human gut microbiome in healthy and diseased
states have emphasized the bacterial component, but the fungal microbiome (ie, the …

Fungal evolution: diversity, taxonomy and phylogeny of the Fungi

MA Naranjo‐Ortiz, T Gabaldón - Biological Reviews, 2019 - Wiley Online Library
The fungal kingdom comprises a hyperdiverse clade of heterotrophic eukaryotes
characterized by the presence of a chitinous cell wall, the loss of phagotrophic capabilities …

[HTML][HTML] Regional-scale in-depth analysis of soil fungal diversity reveals strong pH and plant species effects in Northern Europe

L Tedersoo, S Anslan, M Bahram, R Drenkhan… - Frontiers in …, 2020 - frontiersin.org
Soil microbiome has a pivotal role in ecosystem functioning, yet little is known about its build-
up from local to regional scales. In a multi-year regional-scale survey involving 1251 plots …