Long read genome assemblies complemented by single cell RNA-sequencing reveal genetic and cellular mechanisms underlying the adaptive evolution of yak

X Gao, S Wang, YF Wang, S Li, SX Wu, RG Yan… - Nature …, 2022 - nature.com
Wild yak (Bos mutus) and domestic yak (Bos grunniens) are adapted to high altitude
environment and have ecological, economic, and cultural significances on the Qinghai …

Linkages between rumen microbiome, host, and environment in yaks, and their implications for understanding animal production and management

W Wang, Y Dong, W Guo, X Zhang, AA Degen… - Frontiers in …, 2024 - frontiersin.org
Livestock on the Qinghai-Tibetan Plateau is of great importance for the livelihood of the local
inhabitants and the ecosystem of the plateau. The natural, harsh environment has shaped …

LAGOS-NE: a multi-scaled geospatial and temporal database of lake ecological context and water quality for thousands of US lakes

PA Soranno, LC Bacon, M Beauchene, KE Bednar… - …, 2017 - academic.oup.com
Understanding the factors that affect water quality and the ecological services provided by
freshwater ecosystems is an urgent global environmental issue. Predicting how water quality …

Structural variants selected during yak domestication inferred from long-read whole-genome sequencing

S Zhang, W Liu, X Liu, X Du, K Zhang… - Molecular biology …, 2021 - academic.oup.com
Structural variants (SVs) represent an important genetic resource for both natural and
artificial selection. Here we present a chromosome-scale reference genome for domestic …

[HTML][HTML] 高原家养动物环境适应性的研究进展

张天留, 高雪, 徐凌洋, 陈燕, 张路培, 朱波, 高会江… - 畜牧兽医学报, 2020 - xml-data.org
青藏高原环境主要体现为低氧低压, 寒冷干燥, 紫外线强, 食物匮乏等, 而高原家养动物经历了
长期的选择和培育后能够生活在此环境下, 其机体已经形成了独特的高原适应性特征 …

CNVcaller: highly efficient and widely applicable software for detecting copy number variations in large populations

X Wang, Z Zheng, Y Cai, T Chen, C Li, W Fu… - …, 2017 - academic.oup.com
Background The increasing amount of sequencing data available for a wide variety of
species can be theoretically used for detecting copy number variations (CNVs) at the …

Mitogenomic diversity and phylogeny analysis of yak (Bos grunniens)

X Wang, J Pei, P Bao, M Cao, S Guo, R Song, W Song… - BMC genomics, 2021 - Springer
Background and aim Mitochondrial genome has aseries of characteristics such as simple
structure, no recombination, maternalinheritance, stable structure, fast evolution rate, and …

Rapid parallel adaptation despite gene flow in silent crickets

X Zhang, JG Rayner, M Blaxter, NW Bailey - Nature Communications, 2021 - nature.com
Gene flow is predicted to impede parallel adaptation via de novo mutation, because it can
introduce pre-existing adaptive alleles from population to population. We test this using …

Genome-wide genetic structure and selection signatures for color in 10 traditional Chinese yellow-feathered chicken breeds

X Huang, NO Otecko, M Peng, Z Weng, W Li, J Chen… - BMC genomics, 2020 - Springer
Abstract Background Yellow-feathered chickens (YFCs) have a long history in China. They
are well-known for the nutritional and commercial importance attributable to their yellow …

Genome-wide detection of copy number variation in American mink using whole-genome sequencing

P Davoudi, DN Do, B Rathgeber, SM Colombo… - BMC genomics, 2022 - Springer
Abstract Background Copy number variations (CNVs) represent a major source of genetic
diversity and contribute to the phenotypic variation of economically important traits in …