Control of poly (A) tail length

CR Eckmann, C Rammelt… - Wiley Interdisciplinary …, 2011 - Wiley Online Library
Poly (A) tails have long been known as stable 3′ modifications of eukaryotic mRNAs,
added during nuclear pre‐mRNA processing. It is now appreciated that this modification is …

Translation initiation by cap‐dependent ribosome recruitment: Recent insights and open questions

NE Shirokikh, T Preiss - Wiley Interdisciplinary Reviews: RNA, 2018 - Wiley Online Library
Gene expression universally relies on protein synthesis, where ribosomes recognize and
decode the messenger RNA template by cycling through translation initiation, elongation …

Power analysis of single-cell RNA-sequencing experiments

V Svensson, KN Natarajan, LH Ly, RJ Miragaia… - Nature …, 2017 - nature.com
Single-cell RNA sequencing (scRNA-seq) has become an established and powerful method
to investigate transcriptomic cell-to-cell variation, thereby revealing new cell types and …

Global view on the metabolism of RNA poly(A) tails in yeast Saccharomyces cerevisiae

A Tudek, PS Krawczyk, S Mroczek, R Tomecki… - Nature …, 2021 - nature.com
The polyadenosine tail (poly [A]-tail) is a universal modification of eukaryotic messenger
RNAs (mRNAs) and non-coding RNAs (ncRNAs). In budding yeast, Pap1-synthesized …

Poly (A) inclusive RNA isoform sequencing (PAIso− seq) reveals wide-spread non-adenosine residues within RNA poly (A) tails

Y Liu, H Nie, H Liu, F Lu - Nature communications, 2019 - nature.com
Message RNA poly (A) tails are vital for their function and regulation. However, the full-
length sequence of mRNA isoforms with their poly (A) tails remains undetermined. Here, we …

[HTML][HTML] A transcriptome-wide atlas of RNP composition reveals diverse classes of mRNAs and lncRNAs

AC Tuck, D Tollervey - Cell, 2013 - cell.com
Eukaryotic genomes generate a heterogeneous ensemble of mRNAs and long noncoding
RNAs (lncRNAs). LncRNAs and mRNAs are both transcribed by Pol II and acquire 5′ caps …

[HTML][HTML] Mechanistic insights into mRNA 3′-end processing

A Kumar, M Clerici, LM Muckenfuss… - Current Opinion in …, 2019 - Elsevier
Highlights•Integrated structural biology approaches have provided new insights into the
mechanism of eukaryotic mRNA 3′-end processing.•The polymerase modules of yeast and …

[HTML][HTML] Disengaging polymerase: terminating RNA polymerase II transcription in budding yeast

HE Mischo, NJ Proudfoot - Biochimica et Biophysica Acta (BBA)-Gene …, 2013 - Elsevier
Termination of transcription by RNA polymerase II requires two distinct processes: The
formation of a defined 3′ end of the transcribed RNA, as well as the disengagement of RNA …

Nuclear export of mRNA

M Stewart - Trends in biochemical sciences, 2010 - cell.com
The nuclear export of mRNA, in which Mex67–Mtr2 mediates movement of mature
transcripts through nuclear pores, represents the culmination of the nuclear portion of the …

Birth of a poly (A) tail: mechanisms and control of mRNA polyadenylation

JB Rodríguez‐Molina, M Turtola - FEBS Open Bio, 2023 - Wiley Online Library
During their synthesis in the cell nucleus, most eukaryotic mRNAs undergo a two‐step 3′‐
end processing reaction in which the pre‐mRNA is cleaved and released from the …