Bacterial ribonucleases and their roles in RNA metabolism

DH Bechhofer, MP Deutscher - Critical reviews in biochemistry and …, 2019 - Taylor & Francis
Ribonucleases (RNases) are mediators in most reactions of RNA metabolism. In recent
years, there has been a surge of new information about RNases and the roles they play in …

The critical role of RNA processing and degradation in the control of gene expression

CM Arraiano, JM Andrade, S Domingues… - FEMS microbiology …, 2010 - academic.oup.com
The continuous degradation and synthesis of prokaryotic mRNAs not only give rise to the
metabolic changes that are required as cells grow and divide but also rapid adaptation to …

Polynucleotide phosphorylase functions both as a 3′ → 5′ exonuclease and a poly(A) polymerase in Escherichia coli

BK Mohanty, SR Kushner - Proceedings of the National …, 2000 - National Acad Sciences
In vitro, polynucleotide phosphorylase of Escherichia coli can both synthesize RNA by using
nucleotide diphosphates as precursors and exonucleolytically degrade RNA in the presence …

The Sm‐like protein Hfq regulates polyadenylation dependent mRNA decay in Escherichia coli

BK Mohanty, VF Maples, SR Kushner - Molecular microbiology, 2004 - Wiley Online Library
In Escherichia coli, the post‐transcriptional addition of poly (A) tails by poly (A) polymerase I
(PAP I, pcnB) plays a significant role in cellular RNA metabolism. However, many important …

mRNA Decay in Escherichia coli Comes of Age

SR Kushner - Journal of bacteriology, 2002 - Am Soc Microbiol
When Apirion first proposed that mRNA decay in Escherichia coli involves a series of endo-
and exonucleolytic events (2), the general working assumption was that the turnover of …

RNA remodeling and gene regulation by cold shock proteins

S Phadtare, K Severinov - RNA biology, 2010 - Taylor & Francis
One of the many important consequences that temperature down-shift has on cells is
stabilization of secondary structures of RNAs. This stabilization has wide-spread effects …

Emerging features of mRNA decay in bacteria.

DA Steege - Rna, 2000 - rnajournal.cshlp.org
The problem of mRNA decay in E. coli has recently seen exciting progress, with the
discoveries that key degradation enzymes are associated together in a high molecular …

The poly (A) binding protein Hfq protects RNA from RNase E and exoribonucleolytic degradation

M Folichon, V Arluison, O Pellegrini… - Nucleic acids …, 2003 - academic.oup.com
The Hfq protein, which shares sequence and structural homology with the Sm and Lsm
proteins, binds to various RNAs, primarily recognizing AU‐rich single‐stranded regions. In …

The post-transcriptional life of mammalian mitochondrial RNA

J Rorbach, M Minczuk - Biochemical Journal, 2012 - portlandpress.com
Mammalian mitochondria contain their own genome that encodes mRNAs for thirteen
essential subunits of the complexes performing oxidative phosporylation as well as the RNA …

RNase R degrades non‐stop mRNAs selectively in an SmpB‐tmRNA‐dependent manner

J Richards, P Mehta, AW Karzai - Molecular microbiology, 2006 - Wiley Online Library
The SmpB‐tmRNA‐mediated trans‐translation system has two well‐established activities:
rescuing ribosomes stalled on aberrant mRNAs and marking the associated protein …