Artificial intelligence in drug development: present status and future prospects

KK Mak, MR Pichika - Drug discovery today, 2019 - Elsevier
Highlights•Advances in artificial intelligence (AI) are modernising several aspects of our
lives.•The pharma industry is facing challenges to overcome the high attrition rates in drug …

[HTML][HTML] Current progress in structure-based rational drug design marks a new mindset in drug discovery

V Lounnas, T Ritschel, J Kelder, R McGuire… - Computational and …, 2013 - Elsevier
The past decade has witnessed a paradigm shift in preclinical drug discovery with structure-
based drug design (SBDD) making a comeback while high-throughput screening (HTS) …

Do we need different machine learning algorithms for QSAR modeling? A comprehensive assessment of 16 machine learning algorithms on 14 QSAR data sets

Z Wu, M Zhu, Y Kang, ELH Leung, T Lei… - Briefings in …, 2021 - academic.oup.com
Although a wide variety of machine learning (ML) algorithms have been utilized to learn
quantitative structure–activity relationships (QSARs), there is no agreed single best …

POVME 2.0: an enhanced tool for determining pocket shape and volume characteristics

JD Durrant, L Votapka, J Sørensen… - Journal of chemical …, 2014 - ACS Publications
Analysis of macromolecular/small-molecule binding pockets can provide important insights
into molecular recognition and receptor dynamics. Since its release in 2011, the POVME …

[HTML][HTML] Deep learning for in vitro prediction of pharmaceutical formulations

Y Yang, Z Ye, Y Su, Q Zhao, X Li, D Ouyang - Acta pharmaceutica sinica B, 2019 - Elsevier
Current pharmaceutical formulation development still strongly relies on the traditional trial-
and-error methods of pharmaceutical scientists. This approach is laborious, time-consuming …

[HTML][HTML] Molden 2.0: quantum chemistry meets proteins

G Schaftenaar, E Vlieg, G Vriend - Journal of computer-aided molecular …, 2017 - Springer
Since the first distribution of Molden in 1995 and the publication of the first article about this
software in 2000 work on Molden has continued relentlessly. A few of the many improved or …

The impact of in silico screening in the discovery of novel and safer drug candidates

D Rognan - Pharmacology & therapeutics, 2017 - Elsevier
Drug discovery is a multidisciplinary and multivariate optimization endeavor. As such, in
silico screening tools have gained considerable importance to archive, analyze and exploit …

Best practices for QSAR model reporting: physical and chemical properties, ecotoxicity, environmental fate, human health, and toxicokinetics endpoints

G Piir, I Kahn, AT García-Sosa, S Sild… - Environmental health …, 2018 - ehp.niehs.nih.gov
Background: Quantitative and qualitative structure–activity relationships (QSARs) have been
used to understand chemical behavior for almost a century. The main source of QSAR …

Emerging role of artificial intelligence in therapeutics for COVID-19: a systematic review

K Kaushal, P Sarma, SV Rana, B Medhi… - Journal of …, 2022 - Taylor & Francis
To elucidate the role of artificial intelligence (AI) in therapeutics for coronavirus disease
2019 (COVID-19). Five databases were searched (December 2019–May 2020). We …

Drug design workshop: A web-based educational tool to introduce computer-aided drug design to the general public

A Daina, MC Blatter, V Baillie Gerritsen… - Journal of Chemical …, 2017 - ACS Publications
Due to its impact on society, the design of new drugs has the potential to interest a wide
audience, and provides a rare opportunity to introduce several concepts in chemistry and …