Advances in spatial transcriptomics and its applications in cancer research

Y Jin, Y Zuo, G Li, W Liu, Y Pan, T Fan, X Fu, X Yao… - Molecular Cancer, 2024 - Springer
Malignant tumors have increasing morbidity and high mortality, and their occurrence and
development is a complicate process. The development of sequencing technologies …

The cellular-centered view of hypoxia tumor microenvironment: Molecular mechanisms and therapeutic interventions

TQ Zhang, QY Lv, WL Jin - Biochimica et Biophysica Acta (BBA)-Reviews …, 2024 - Elsevier
Cancer is a profoundly dynamic, heterogeneous and aggressive systemic ailment, with a
coordinated evolution of various types of tumor niches. Hypoxia plays an indispensable role …

mosaicMPI: a framework for modular data integration across cohorts and-omics modalities

TB Verhey, H Seo, A Gillmor… - Nucleic Acids …, 2024 - academic.oup.com
Advances in molecular profiling have facilitated generation of large multi-modal datasets
that can potentially reveal critical axes of biological variation underlying complex diseases …

A developmental constraint model of cancer cell states and tumor heterogeneity

AS Patel, I Yanai - Cell, 2024 - cell.com
Cancer is a disease that stems from a fundamental liability inherent to multicellular life forms
in which an individual cell is capable of reneging on the interests of the collective organism …

The Role of Mesenchymal Reprogramming in Malignant Clonal Evolution and Intra-Tumoral Heterogeneity in Glioblastoma

Q Wu, AE Berglund, RJ Macaulay, AB Etame - Cells, 2024 - mdpi.com
Glioblastoma (GBM) is the most common yet uniformly fatal adult brain cancer. Intra-tumoral
molecular and cellular heterogeneities are major contributory factors to therapeutic …

[HTML][HTML] Spatial analysis of recurrent glioblastoma reveals perivascular niche organization

U Onubogu, CD Gatenbee, S Prabhakaran, KL Wolfe… - JCI insight, 2024 - insight.jci.org
JCI Insight - Spatial analysis of recurrent glioblastoma reveals perivascular niche
organization Go to The Journal of Clinical Investigation About Editors Consulting Editors For …

[HTML][HTML] 2D and 3D multiplexed subcellular profiling of nuclear instability in human cancer

S Coy, B Cheng, JS Lee, R Rashid, L Browning, Y Xu… - bioRxiv, 2023 - ncbi.nlm.nih.gov
Nuclear atypia, including altered nuclear size, contour, and chromatin organization, is
ubiquitous in cancer cells. Atypical primary nuclei and micronuclei can rupture during …

Mapping myeloid cell function: Spatial diversity in tumor and neuronal microenvironment

G Villa, D Delev, DH Heiland - Cancer Cell, 2024 - Elsevier
In this issue of Cancer Cell, Zhong et al. explore the dual role of TREM2 in glioblastoma-
associated myeloid cells, demonstrating its function in promoting inflammation at the tumor …

Intrinsic and Microenvironmental Drivers of Glioblastoma Invasion

E De Fazio, M Pittarello, A Gans, B Ghosh… - International journal of …, 2024 - mdpi.com
Gliomas are diffusely infiltrating brain tumors whose prognosis is strongly influenced by their
extent of invasion into the surrounding brain tissue. While lower-grade gliomas present more …

[HTML][HTML] Decoding heterogeneous and coordinated tissue architecture in glioblastoma using spatial transcriptomics

X Lv, B Wang, K Liu, MJ Li, X Yi, X Wu - iScience, 2024 - cell.com
Glioblastoma multiforme (GBM) is one of the most lethal brain tumors, characterized by
profound heterogeneity. While single-cell transcriptomic studies have revealed extensive …