Targeting RNA structures with small molecules

JL Childs-Disney, X Yang, QMR Gibaut… - Nature Reviews Drug …, 2022 - nature.com
RNA adopts 3D structures that confer varied functional roles in human biology and
dysfunction in disease. Approaches to therapeutically target RNA structures with small …

[HTML][HTML] Principles for targeting RNA with drug-like small molecules

KD Warner, CE Hajdin, KM Weeks - Nature reviews Drug discovery, 2018 - nature.com
RNA molecules are essential for cellular information transfer and gene regulation, and
RNAs have been implicated in many human diseases. Messenger and non-coding RNAs …

Small-molecule–induced DNA damage identifies alternative DNA structures in human genes

R Rodriguez, KM Miller, JV Forment… - Nature chemical …, 2012 - nature.com
Guanine-rich DNA sequences that can adopt non–Watson-Crick structures in vitro are
prevalent in the human genome. Whether such structures normally exist in mammalian cells …

Inhibition of RNA-binding proteins with small molecules

P Wu - Nature Reviews Chemistry, 2020 - nature.com
Protein–RNA interactions have crucial roles in various cellular activities, which, when
dysregulated, can lead to a range of human diseases. The identification of small molecules …

Mass spectrometry of nucleic acid noncovalent complexes

E Largy, A Konig, A Ghosh, D Ghosh… - Chemical …, 2021 - ACS Publications
Nucleic acids have been among the first targets for antitumor drugs and antibiotics. With the
unveiling of new biological roles in regulation of gene expression, specific DNA and RNA …

5′-UTR RNA G-quadruplexes: translation regulation and targeting

A Bugaut, S Balasubramanian - Nucleic acids research, 2012 - academic.oup.com
RNA structures in the untranslated regions (UTRs) of mRNAs influence post-transcriptional
regulation of gene expression. Much of the knowledge in this area depends on canonical …

The emerging role of RNA as a therapeutic target for small molecules

CM Connelly, MH Moon, JS Schneekloth - Cell chemical biology, 2016 - cell.com
Recent advances in understanding different RNAs and unique features of their biology have
revealed a wealth of information. However, approaches to identify small molecules that …

Sequence-based design of bioactive small molecules that target precursor microRNAs

SP Velagapudi, SM Gallo, MD Disney - Nature chemical biology, 2014 - nature.com
Oligonucleotides are designed to target RNA using base pairing rules, but they can be
hampered by poor cellular delivery and nonspecific stimulation of the immune system. Small …

Selective Small-Molecule Targeting of a Triple Helix Encoded by the Long Noncoding RNA, MALAT1

FA Abulwerdi, W Xu, AA Ageeli… - ACS chemical …, 2019 - ACS Publications
Metastasis-associated lung adenocarcinoma transcript 1 (Malat1/MALAT1, mouse/human),
a highly conserved long noncoding (lnc) RNA, has been linked with several physiological …

Inforna 2.0: a platform for the sequence-based design of small molecules targeting structured RNAs

MD Disney, AM Winkelsas, SP Velagapudi… - ACS chemical …, 2016 - ACS Publications
The development of small molecules that target RNA is challenging yet, if successful, could
advance the development of chemical probes to study RNA function or precision …