Optimizing genomic-enabled prediction in small-scale maize hybrid breeding programs: a roadmap review

R Fritsche-Neto, G Galli, KLR Borges… - Frontiers in Plant …, 2021 - frontiersin.org
The usefulness of genomic prediction (GP) for many animal and plant breeding programs
has been highlighted for many studies in the last 20 years. In maize breeding programs …

Does the definition of a novel environment affect the ability to detect cryptic genetic variation?

CL Riley, V Oostra, SJ Plaistow - Journal of Evolutionary Biology, 2023 - academic.oup.com
Anthropogenic change exposes populations to environments that have been rare or entirely
absent from their evolutionary past. Such novel environments are hypothesized to release …

The combining ability of extra-early maturing quality protein maize (Zea mays) inbred lines and the performance of their hybrids in Striga-infested and low-nitrogen …

G Okunlola, B Badu-Apraku, O Ariyo… - Frontiers in Sustainable …, 2023 - frontiersin.org
Maize production in sub-Saharan Africa (SSA) faces challenges due to the damage caused
by the parasitic weed, Striga hermonthica (Del.) Benths and low soil nitrogen. To address …

An assessment of the factors influencing the prediction accuracy of genomic prediction models across multiple environments

S Widener, G Graef, AE Lipka, D Jarquin - Frontiers in Genetics, 2021 - frontiersin.org
The effects of climate change create formidable challenges for breeders striving to produce
sufficient food quantities in rapidly changing environments. It is therefore critical to …

Utilizing genomic prediction to boost hybrid performance in a sweet corn breeding program

MA Peixoto, KA Leach, D Jarquin, P Flannery… - Frontiers in Plant …, 2024 - frontiersin.org
Sweet corn breeding programs, like field corn, focus on the development of elite inbred lines
to produce commercial hybrids. For this reason, genomic selection models can help the in …

Mega-environment analysis to assess adaptability, stability, and genomic predictions in grain sorghum hybrids

JMO Fonseca, R Perumal, PE Klein, RR Klein… - Euphytica, 2022 - Springer
Multi-environment trials (MET) are fundamental for assessing genotype-by-environment
interaction (GxE) effects, adaptability and stability of genotypes and provide valuable …

Assessing the agronomic potential of sorghum B‐lines using genomic prediction

MA Kent, JMO Fonseca, PE Klein, RR Klein… - Crop …, 2023 - Wiley Online Library
In hybrid sorghum breeding, basic agronomic traits, such as days to flowering and plant
height, of sorghum seed parents must be within a specific range for hybrid seed production …

Automated machine learning: a case study of genomic “image-based” prediction in maize hybrids

G Galli, F Sabadin, RM Yassue, C Galves… - Frontiers in Plant …, 2022 - frontiersin.org
Machine learning methods such as multilayer perceptrons (MLP) and Convolutional Neural
Networks (CNN) have emerged as promising methods for genomic prediction (GP). In this …

[HTML][HTML] Genotype by Environment Interaction and Stability Analysis for Grain Yield in White Seeded Tef [Eragrostis tef (zucc.)Trotter] Genotypes in Western Oromia …

G Chemeda, N Bakala - Plant, 2024 - eurjpm.org
Abstract Tef [Eragrostis tef (Zucc.) Trotter L.] is a most important cereal crop in Ethiopia in
terms of production, consumption and cash. The study was carried out to investigate grain …

Population Genomics of Maize

MPM Resende, AJC Filho, AM Antunes… - … Genomics: Crop Plants, 2022 - Springer
One of the most explored crop plants in genomics studies is maize (Zea mays L.). It has
served as a model for developing and incorporating biotechnology and genomics …