Whole genome bisulfite sequencing methylome analysis of mulberry (Morus alba) reveals epigenome modifications in response to drought stress
R Li, F Hu, B Li, Y Zhang, M Chen, T Fan, T Wang - Scientific Reports, 2020 - nature.com
DNA methylation plays a significant role in many biological processes. Although some
studies of DNA methylation have been performed in woody plant, none is known about the …
studies of DNA methylation have been performed in woody plant, none is known about the …
Opportunities and limitations of reduced representation bisulfite sequencing in plant ecological epigenomics
Contents Summary 738 I. Introduction 738 II. RRBS loci as genome‐wide epigenetic
markers 739 III. Exploiting functional annotation of RRBS loci 739 IV. Limitations of RRBS …
markers 739 III. Exploiting functional annotation of RRBS loci 739 IV. Limitations of RRBS …
A comparative analysis of 5-azacytidine-and zebularine-induced DNA demethylation
PT Griffin, CE Niederhuth… - G3: Genes, Genomes …, 2016 - academic.oup.com
The nonmethylable cytosine analogs, 5-azacytidine and zebularine, are widely used to
inhibit DNA methyltransferase activity and reduce genomic DNA methylation. In this study …
inhibit DNA methyltransferase activity and reduce genomic DNA methylation. In this study …
Epimutations are associated with CHROMOMETHYLASE 3-induced de novo DNA methylation
In many plant species, a subset of transcribed genes are characterized by strictly CG-context
DNA methylation, referred to as gene body methylation (gbM). The mechanisms that …
DNA methylation, referred to as gene body methylation (gbM). The mechanisms that …
Mild drought in the vegetative stage induces phenotypic, gene expression, and DNA methylation plasticity in Arabidopsis but no transgenerational effects
TJM Van Dooren, AB Silveira, E Gilbault… - Journal of …, 2020 - academic.oup.com
There is renewed interest in whether environmentally induced changes in phenotypes can
be heritable. In plants, heritable trait variation can occur without DNA sequence mutations …
be heritable. In plants, heritable trait variation can occur without DNA sequence mutations …
DNA demethylases remodel DNA methylation in rice gametes and zygote and are required for reproduction
Fertilization constitutes a critical step in the plant life cycle during which the gamete
genomes undergo chromatin dynamics in preparation for embryogenesis. In mammals …
genomes undergo chromatin dynamics in preparation for embryogenesis. In mammals …
Epigenetic marks for mitigating abiotic stresses in plants
Abiotic stressors are one of the major factors affecting agricultural output. Plants have
evolved adaptive systems to respond appropriately to various environmental cues. These …
evolved adaptive systems to respond appropriately to various environmental cues. These …
Diploid and tetraploid genomes of Acorus and the evolution of monocots
L Ma, KW Liu, Z Li, YY Hsiao, Y Qi, T Fu… - Nature …, 2023 - nature.com
Monocots are a major taxon within flowering plants, have unique morphological traits, and
show an extraordinary diversity in lifestyle. To improve our understanding of monocot origin …
show an extraordinary diversity in lifestyle. To improve our understanding of monocot origin …
DNA hypomethylation of the host tree impairs interaction with mutualistic ectomycorrhizal fungus
J Vigneaud, A Kohler, MD Sow, A Delaunay… - New …, 2023 - Wiley Online Library
Ectomycorrhizas are an intrinsic component of tree nutrition and responses to environmental
variations. How epigenetic mechanisms might regulate these mutualistic interactions is …
variations. How epigenetic mechanisms might regulate these mutualistic interactions is …
Stochasticity in gene body methylation
C Goeldel, F Johannes - Current Opinion in Plant Biology, 2023 - Elsevier
Gene body methylation (gbM) is a widely conserved epigenetic feature of plant genomes.
Efforts to delineate the mechanisms by which gbM contributes to transcriptional regulation …
Efforts to delineate the mechanisms by which gbM contributes to transcriptional regulation …