Patterns and consequences of subgenome differentiation provide insights into the nature of paleopolyploidy in plants

M Zhao, B Zhang, D Lisch, J Ma - The Plant Cell, 2017 - academic.oup.com
Polyploidy is an important feature of plant genomes, but the nature of many polyploidization
events remains to be elucidated. Here, we demonstrate that the evolutionary fates of the …

[PDF][PDF] Spreading Winge and flying high: the evolutionary importance of polyploidy after a century of study

MS Barker, BC Husband, JC Pires - American journal of botany, 2016 - academia.edu
McGrath et al., 2014; Scienski et al., 2015) revealed that many eukaryotes do indeed have a
polyploid ancestry. Although there have been recent debates on the average fate of …

Genome resequencing and comparative variome analysis in a Brassica rapa and Brassica oleracea collection

F Cheng, J Wu, C Cai, L Fu, J Liang, T Borm, M Zhuang… - Scientific data, 2016 - nature.com
The closely related species Brassica rapa and B. oleracea encompass a wide range of
vegetable, fodder and oil crops. The release of their reference genomes has facilitated …

Two-step model of paleohexaploidy, ancestral genome reshuffling and plasticity of heat shock response in Asteraceae

X Kong, Y Zhang, Z Wang, S Bao, Y Feng… - Horticulture …, 2023 - academic.oup.com
An ancient hexaploidization event in the most but not all Asteraceae plants, may have been
responsible for shaping the genomes of many horticultural, ornamental, and medicinal …

The contributions from the progenitor genomes of the mesopolyploid Brassiceae are evolutionarily distinct but functionally compatible

Y Hao, ME Mabry, PP Edger, M Freeling… - Genome …, 2021 - genome.cshlp.org
The members of the tribe Brassiceae share a whole-genome triplication (WGT), and one
proposed model for its formation is a two-step pair of hybridizations producing hexaploid …

Genome-Wide Identification and Characterization of the Aquaporin Gene Family and Transcriptional Responses to Boron Deficiency in Brassica napus

D Yuan, W Li, Y Hua, GJ King, F Xu, L Shi - Frontiers in Plant Science, 2017 - frontiersin.org
Aquaporins (AQPs) are an abundant protein family and play important roles to facilitate
small neutral molecule transport across membranes. Oilseed rape (Brassica napus L.) is an …

Genome sequencing supports a multi-vertex model for Brassiceae species

F Cheng, J Liang, C Cai, X Cai, J Wu… - Current opinion in plant …, 2017 - Elsevier
Highlights•R. sativus has a similar position in genome evolution as that of
Brassicas.•Brassica “triangle of U” was extended to an open system as a multi-vertex …

The lasting after-effects of an ancient polyploidy on the genomes of teleosts

GC Conant - PLoS One, 2020 - journals.plos.org
The ancestor of most teleost fishes underwent a whole-genome duplication event three
hundred million years ago. Despite its antiquity, the effects of this event are evident both in …

Sinapis genomes provide insights into whole‐genome triplication and divergence patterns within tribe Brassiceae

T Yang, B Cai, Z Jia, Y Wang, J Wang… - The Plant …, 2023 - Wiley Online Library
Sinapis alba and Sinapis arvensis are mustard crops within the Brassiceae tribe of the
Brassicaceae family, and represent an important genetic resource for crop improvement. We …

Genome-wide DNA methylation profiling by modified reduced representation bisulfite sequencing in Brassica rapa suggests that epigenetic modifications play a key …

X Chen, X Ge, J Wang, C Tan, GJ King… - Frontiers in plant …, 2015 - frontiersin.org
Brassica rapa includes some of the most important vegetables worldwide as well as oilseed
crops. The complete annotated genome sequence confirmed its paleohexaploid origins and …