[HTML][HTML] A comprehensive review of fluorescence correlation spectroscopy

L Yu, Y Lei, Y Ma, M Liu, J Zheng, D Dan, P Gao - Frontiers in physics, 2021 - frontiersin.org
Fluorescence correlation spectroscopy (FCS) is a powerful technique for quantification of
molecular dynamics, and it has been widely applied in diverse fields, eg, biomedicine …

Generation of extracellular morphogen gradients: the case for diffusion

KS Stapornwongkul, JP Vincent - Nature Reviews Genetics, 2021 - nature.com
Cells within developing tissues rely on morphogens to assess positional information.
Passive diffusion is the most parsimonious transport model for long-range morphogen …

Techniques for the analysis of protein-protein interactions in vivo

S Xing, N Wallmeroth, KW Berendzen… - Plant physiology, 2016 - academic.oup.com
Identifying key players and their interactions is fundamental for understanding biochemical
mechanisms at the molecular level. The ever-increasing number of alternative ways to …

Single-molecule displacement mapping unveils nanoscale heterogeneities in intracellular diffusivity

L Xiang, K Chen, R Yan, W Li, K Xu - Nature methods, 2020 - nature.com
Intracellular diffusion underlies vital cellular processes. However, it remains difficult to
elucidate how an unbound protein diffuses inside the cell with good spatial resolution and …

Current capabilities and future perspectives of FCS: super-resolution microscopy, machine learning, and in vivo applications

J Sankaran, T Wohland - Communications Biology, 2023 - nature.com
Fluorescence correlation spectroscopy (FCS) is a single molecule sensitive tool for the
quantitative measurement of biomolecular dynamics and interactions. Improvements in …

Single-molecule displacement mapping indicates unhindered intracellular diffusion of small (≲ 1 kDa) solutes

AA Choi, L Xiang, W Li, K Xu - Journal of the American Chemical …, 2023 - ACS Publications
While fundamentally important, the intracellular diffusion of small (≲ 1 kDa) solutes has been
difficult to elucidate due to challenges in both labeling and measurement. Here we quantify …

Retrieving the intracellular topology from multi-scale protein mobility mapping in living cells

M Baum, F Erdel, M Wachsmuth, K Rippe - Nature communications, 2014 - nature.com
In living cells, most proteins diffuse over distances of micrometres within seconds. Protein
translocation is constrained due to the cellular organization into subcompartments that …

Machine-learning-powered extraction of molecular diffusivity from single-molecule images for super-resolution mapping

HH Park, B Wang, S Moon, T Jepson, K Xu - Communications Biology, 2023 - nature.com
While critical to biological processes, molecular diffusion is difficult to quantify, and spatial
mapping of local diffusivity is even more challenging. Here we report a machine-learning …

Discovering cellular protein‐protein interactions: Technological strategies and opportunities

K Titeca, I Lemmens, J Tavernier… - Mass spectrometry …, 2019 - Wiley Online Library
The analysis of protein interaction networks is one of the key challenges in the study of
biology. It connects genotypes to phenotypes, and disruption often leads to diseases …

Exploring the protein–protein interaction landscape in plants

S Struk, A Jacobs… - Plant, cell & …, 2019 - Wiley Online Library
Protein–protein interactions (PPIs) represent an essential aspect of plant systems biology.
Identification of key protein players and their interaction networks provide crucial insights …