RNA-binding proteins in tumor progression
H Qin, H Ni, Y Liu, Y Yuan, T Xi, X Li… - Journal of hematology & …, 2020 - Springer
RNA-binding protein (RBP) has a highly dynamic spatiotemporal regulation process and
important biological functions. They are critical to maintain the transcriptome through post …
important biological functions. They are critical to maintain the transcriptome through post …
The RNA polymerase II carboxy-terminal domain (CTD) code
D Eick, M Geyer - Chemical reviews, 2013 - ACS Publications
The smallest viable unit of life is the cell. From bacteria to mammals, all cells use the same
nucleic acid-based universal code for the maintenance and inheritance of genetic …
nucleic acid-based universal code for the maintenance and inheritance of genetic …
Remodeling oncogenic transcriptomes by small molecules targeting NONO
SG Kathman, SJ Koo, GL Lindsey, HL Her… - Nature chemical …, 2023 - nature.com
Much of the human proteome is involved in mRNA homeostasis, but most RNA-binding
proteins lack chemical probes. Here we identify electrophilic small molecules that rapidly …
proteins lack chemical probes. Here we identify electrophilic small molecules that rapidly …
Principles of RNA processing from analysis of enhanced CLIP maps for 150 RNA binding proteins
EL Van Nostrand, GA Pratt, BA Yee, EC Wheeler… - Genome biology, 2020 - Springer
Background A critical step in uncovering rules of RNA processing is to study the in vivo
regulatory networks of RNA binding proteins (RBPs). Crosslinking and immunoprecipitation …
regulatory networks of RNA binding proteins (RBPs). Crosslinking and immunoprecipitation …
The DBHS proteins SFPQ, NONO and PSPC1: a multipurpose molecular scaffold
Nuclear proteins are often given a concise title that captures their function, such as
'transcription factor,''polymerase'or 'nuclear-receptor.'However, for members of the …
'transcription factor,''polymerase'or 'nuclear-receptor.'However, for members of the …
The RNA polymerase II CTD coordinates transcription and RNA processing
The C-terminal domain (CTD) of the RNA polymerase II largest subunit consists of multiple
heptad repeats (consensus Tyr1–Ser2–Pro3–Thr4–Ser5–Pro6–Ser7), varying in number …
heptad repeats (consensus Tyr1–Ser2–Pro3–Thr4–Ser5–Pro6–Ser7), varying in number …
[HTML][HTML] Altered nuclear retention of mRNAs containing inverted repeats in human embryonic stem cells: functional role of a nuclear noncoding RNA
LL Chen, GG Carmichael - Molecular cell, 2009 - cell.com
In many cells, mRNAs containing inverted repeats (Alu repeats in humans) in their 3′
untranslated regions (3′ UTRs) are inefficiently exported to the cytoplasm. Nuclear …
untranslated regions (3′ UTRs) are inefficiently exported to the cytoplasm. Nuclear …
Phosphorylation and functions of the RNA polymerase II CTD
HP Phatnani, AL Greenleaf - Genes & development, 2006 - genesdev.cshlp.org
The C-terminal repeat domain (CTD), an unusual extension appended to the C terminus of
the largest subunit of RNA polymerase II, serves as a flexible binding scaffold for numerous …
the largest subunit of RNA polymerase II, serves as a flexible binding scaffold for numerous …
MetaLnc9 facilitates lung cancer metastasis via a PGK1-activated AKT/mTOR pathway
Long noncoding RNAs (lncRNA) participate in carcinogenesis and tumor progression in
lung cancer. Here, we report the identification of a lncRNA signature associated with …
lung cancer. Here, we report the identification of a lncRNA signature associated with …
Self-assembly of promoter DNA and RNA Pol II machinery into transcriptionally active biomolecular condensates
Transcription in the nucleus occurs in a concentrated, dense environment, and no
reasonable biochemical facsimile of this milieu exists. Such a biochemical environment …
reasonable biochemical facsimile of this milieu exists. Such a biochemical environment …