Genome-wide mapping of i-motifs reveals their association with transcription regulation in live human cells

I Zanin, E Ruggiero, G Nicoletto, S Lago… - Nucleic Acids …, 2023 - academic.oup.com
Abstract i-Motifs (iMs) are four-stranded DNA structures that form at cytosine (C)-rich
sequences in acidic conditions in vitro. Their formation in cells is still under debate. We …

Cut&tag: a powerful epigenetic tool for chromatin profiling

Z Fu, S Jiang, Y Sun, S Zheng, L Zong, P Li - Epigenetics, 2024 - Taylor & Francis
Analysis of transcription factors and chromatin modifications at the genome-wide level
provides insights into gene regulatory processes, such as transcription, cell differentiation …

Current status of genome‐wide epigenetic profiling of mammalian preimplantation embryos

S Ikeda - Reproductive Medicine and Biology, 2023 - Wiley Online Library
Background Genome‐wide information on epigenetic modifications in mammalian
preimplantation embryos was an unexplored sanctuary of valuable research insights …

Evaluating histone modification analysis of individual preimplantation embryos

Y Zeng, Y Hoshino, K Susami, S Honda, N Minami… - BMC genomics, 2024 - Springer
Background We previously reported a modification of the CUT&Tag method (NTU-CAT) that
allows genome-wide histone modification analysis in individual preimplantation embryos. In …

Analysis of histone H3K4me3 modifications in bovine placenta derived from different calf‐production methods

K Hattori, Y Hoshino, M Kachi, Y Masuda… - … in Domestic Animals, 2024 - Wiley Online Library
In ruminants, the overgrowth of offspring produced by in vitro fertilization (IVF) is a common
problem. Abnormal epigenetic modifications caused by environmental factors during the …

Diagnostic histone modification analysis of individual preimplantation embryos

Y Zeng, Y Hoshino, K Susami, S Honda, N Minami… - bioRxiv, 2023 - biorxiv.org
Background: We previously reported a modification of the CUT&Tag method (NTU-CAT) that
allows genome-wide histone modification analysis in individual preimplantation embryos. In …