Prediction of drug–protein interaction based on dual channel neural networks with attention mechanism
D Tan, H Jiang, H Li, Y Xie, Y Su - Briefings in Functional …, 2024 - academic.oup.com
The precise identification of drug–protein inter action (DPI) can significantly speed up the
drug discovery process. Bioassay methods are time-consuming and expensive to screen for …
drug discovery process. Bioassay methods are time-consuming and expensive to screen for …
ML-FGAT: Identification of multi-label protein subcellular localization by interpretable graph attention networks and feature-generative adversarial networks
C Wang, Y Wang, P Ding, S Li, X Yu, B Yu - Computers in Biology and …, 2024 - Elsevier
The prediction of multi-label protein subcellular localization (SCL) is a pivotal area in
bioinformatics research. Recent advancements in protein structure research have facilitated …
bioinformatics research. Recent advancements in protein structure research have facilitated …
[HTML][HTML] Semi-supervised heterogeneous graph contrastive learning for drug–target interaction prediction
K Yao, X Wang, W Li, H Zhu, Y Jiang, Y Li… - Computers in Biology …, 2023 - Elsevier
Identification of drug–target interactions (DTIs) is an important step in drug discovery and
drug repositioning. In recent years, graph-based methods have attracted great attention and …
drug repositioning. In recent years, graph-based methods have attracted great attention and …
Current and future directions in network biology
Network biology, an interdisciplinary field at the intersection of computational and biological
sciences, is critical for deepening understanding of cellular functioning and disease. While …
sciences, is critical for deepening understanding of cellular functioning and disease. While …
A comprehensive review of the recent advances on predicting drug-target affinity based on deep learning
X Zeng, SJ Li, SQ Lv, ML Wen, Y Li - Frontiers in Pharmacology, 2024 - frontiersin.org
Accurate calculation of drug-target affinity (DTA) is crucial for various applications in the
pharmaceutical industry, including drug screening, design, and repurposing. However …
pharmaceutical industry, including drug screening, design, and repurposing. However …
THGNCDA: circRNA–disease association prediction based on triple heterogeneous graph network
Y Guo, M Yi - Briefings in Functional Genomics, 2023 - academic.oup.com
Circular RNAs (circRNAs) are a class of noncoding RNA molecules featuring a closed
circular structure. They have been proved to play a significant role in the reduction of many …
circular structure. They have been proved to play a significant role in the reduction of many …
HiSIF-DTA: a hierarchical semantic information fusion framework for drug-target affinity prediction
X Bi, S Zhang, W Ma, H Jiang… - IEEE Journal of …, 2023 - ieeexplore.ieee.org
Accurately identifying drug-target affinity (DTA) plays a significant role in promoting drug
discovery and has attracted increasing attention in recent years. Exploring appropriate …
discovery and has attracted increasing attention in recent years. Exploring appropriate …
Hierarchical and dynamic graph attention network for drug-disease association prediction
In the realm of biomedicine, the prediction of associations between drugs and diseases
holds significant importance. Yet, conventional wet lab experiments often fall short of …
holds significant importance. Yet, conventional wet lab experiments often fall short of …
A deep neural network-based co-coding method to predict drug-protein interactions by analyzing the feature consistency between drugs and proteins
C Sun, R Tang, J Huang, J Wei… - IEEE/ACM Transactions …, 2023 - ieeexplore.ieee.org
Exploring drug-protein interactions (DPIs) through computational methods can effectively
reduce the workload and the cost of DPI identification. Previous works try to predict DPIs by …
reduce the workload and the cost of DPI identification. Previous works try to predict DPIs by …
IMAEN: An interpretable molecular augmentation model for drug–target interaction prediction
J Zhang, Z Liu, Y Pan, H Lin, Y Zhang - Expert Systems with Applications, 2024 - Elsevier
Drug discovery is a crucial aspect of biomedical research, and predicting drug–target
interactions (DTIs) is a vital step in this process. Graph neural networks (GNNs) have …
interactions (DTIs) is a vital step in this process. Graph neural networks (GNNs) have …