Revisiting the relationship between transposable elements and the eukaryotic stress response

V Horváth, M Merenciano, J González - Trends in Genetics, 2017 - cell.com
A relationship between transposable elements (TEs) and the eukaryotic stress response
was suggested in the first publications describing TEs. Since then, it has often been …

Evolution of vertebrate sex chromosomes and dosage compensation

JAM Graves - Nature Reviews Genetics, 2016 - nature.com
Differentiated sex chromosomes in mammals and other vertebrates evolved independently
but in strikingly similar ways. Vertebrates with differentiated sex chromosomes share the …

DNA methylation-free Arabidopsis reveals crucial roles of DNA methylation in regulating gene expression and development

L He, H Huang, M Bradai, C Zhao, Y You, J Ma… - Nature …, 2022 - nature.com
A contribution of DNA methylation to defense against invading nucleic acids and
maintenance of genome integrity is uncontested; however, our understanding of the extent …

Systematic identification of long noncoding RNA s expressed during light‐induced anthocyanin accumulation in apple fruit

T Yang, H Ma, J Zhang, T Wu, T Song, J Tian… - The Plant …, 2019 - Wiley Online Library
Anthocyanin pigments contribute to the red color of apple (Malus× domestica) fruit and have
a major influence on their ornamental, dietary and market value. In this study, we …

Role of long non coding RNA in plants under abiotic and biotic stresses

GK Patra, D Gupta, GR Rout, SK Panda - Plant Physiology and …, 2023 - Elsevier
Evolutionary processes have evolved plants to cope with several different natural stresses.
Basic physiological activities of crop plants are significantly harmed by these stresses …

Long noncoding RNAs and their proposed functions in fibre development of cotton (Gossypium spp.)

M Wang, D Yuan, L Tu, W Gao, Y He, H Hu… - New …, 2015 - Wiley Online Library
Long noncoding RNA s (lnc RNA s) are transcripts of at least 200 bp in length, possess no
apparent coding capacity and are involved in various biological regulatory processes. Until …

Exploring the crop epigenome: a comparison of DNA methylation profiling techniques

DR Agius, A Kapazoglou, E Avramidou… - Frontiers in Plant …, 2023 - frontiersin.org
Epigenetic modifications play a vital role in the preservation of genome integrity and in the
regulation of gene expression. DNA methylation, one of the key mechanisms of epigenetic …

Mechanistic insights into plant SUVH family H3K9 methyltransferases and their binding to context-biased non-CG DNA methylation

X Li, CJ Harris, Z Zhong, W Chen… - Proceedings of the …, 2018 - National Acad Sciences
DNA methylation functions in gene silencing and the maintenance of genome integrity. In
plants, non-CG DNA methylation is linked through a self-reinforcing loop with histone 3 …

Heterosis in genomic era: advances in the molecular understanding and techniques for rapid exploitation

AK Das, M Choudhary, P Kumar… - Critical reviews in …, 2021 - Taylor & Francis
Heterosis has been widely exploited in plants and animals, and also revolutionized
agriculture by improving important agronomic traits. However, the molecular mechanism is …

Differential expression networks and inheritance patterns of long non‐coding RNA s in castor bean seeds

W Xu, T Yang, B Wang, B Han, H Zhou… - The Plant …, 2018 - Wiley Online Library
Long non‐coding RNA s (lnc RNA s) serve as versatile regulators of plant growth and
development. The potential functions and inheritance patterns of lnc RNA s, as well as the …