Effects of fecal microbiota transplantation in subjects with irritable bowel syndrome are mirrored by changes in gut microbiome
Irritable bowel syndrome (IBS) is a common disorder of the lower gastrointestinal tract. The
pathophysiology is far from settled, but a gut microbial dysbiosis is hypothesized to be a …
pathophysiology is far from settled, but a gut microbial dysbiosis is hypothesized to be a …
[HTML][HTML] Microbiome dynamics and genomic determinants of bovine mastitis
A bstract The milk of lactating cows presents a complex ecosystem of interconnected
microbial communities which can influence the pathophysiology of mastitis. We …
microbial communities which can influence the pathophysiology of mastitis. We …
Nasopharyngeal metatranscriptome profiles of infants with bronchiolitis and risk of childhood asthma: a multicentre prospective study
Background Bronchiolitis is not only the leading cause of hospitalisation in US infants but
also a major risk factor for asthma development. Growing evidence supports clinical …
also a major risk factor for asthma development. Growing evidence supports clinical …
Integrative transkingdom analysis of the gut microbiome in antibiotic perturbation and critical illness
Bacterial microbiota play a critical role in mediating local and systemic immunity, and shifts
in these microbial communities have been linked to impaired outcomes in critical illness …
in these microbial communities have been linked to impaired outcomes in critical illness …
[HTML][HTML] Dual transcriptomic profiling of host and microbiota during health and disease in pediatric asthma
Background High-throughput sequencing (HTS) analysis of microbial communities from the
respiratory airways has heavily relied on the 16S rRNA gene. Given the intrinsic limitations …
respiratory airways has heavily relied on the 16S rRNA gene. Given the intrinsic limitations …
Nasopharyngeal airway dual-transcriptome of infants with severe bronchiolitis and risk of childhood asthma: A multicenter prospective study
Background Severe bronchiolitis (ie, bronchiolitis requiring hospitalization) during infancy is
a major risk factor for childhood asthma. However, the exact mechanism linking these …
a major risk factor for childhood asthma. However, the exact mechanism linking these …
Detecting viral sequences in NGS data
PG Cantalupo, JM Pipas - Current opinion in virology, 2019 - Elsevier
Next generation sequencing (NGS) technologies provide an increasingly important avenue
for detecting known viruses, and for discovering novel viruses present in clinical or …
for detecting known viruses, and for discovering novel viruses present in clinical or …
[HTML][HTML] Microbiome signature and diversity regulates the level of energy production under anaerobic condition
The microbiome of the anaerobic digester (AD) regulates the level of energy production. To
assess the microbiome diversity and composition in different stages of anaerobic digestion …
assess the microbiome diversity and composition in different stages of anaerobic digestion …
[HTML][HTML] Entamoeba and Giardia parasites implicated as hosts of CRESS viruses
CM Kinsella, A Bart, M Deijs, P Broekhuizen… - Nature …, 2020 - nature.com
Metagenomic techniques have enabled genome sequencing of unknown viruses without
isolation in cell culture, but information on the virus host is often lacking, preventing viral …
isolation in cell culture, but information on the virus host is often lacking, preventing viral …
Skin microbiome attributes associate with biophysical skin ageing
W Zhou, E Fleming, G Legendre, L Roux… - Experimental …, 2023 - Wiley Online Library
Two major arms of skin ageing are changes in the skin's biophysical conditions and
alterations in the skin microbiome. This work partitioned both arms to study their interaction …
alterations in the skin microbiome. This work partitioned both arms to study their interaction …