Structural diversity among plastid genomes of land plants
JP Mower, TL Vickrey - Advances in botanical research, 2018 - Elsevier
The plastome of land plants is often considered to be highly conserved in sequence,
structure, and content. This is particularly true for nonvascular land plants, for which few …
structure, and content. This is particularly true for nonvascular land plants, for which few …
Single-molecule sequencing and optical mapping yields an improved genome of woodland strawberry (Fragaria vesca) with chromosome-scale contiguity
Background Although draft genomes are available for most agronomically important plant
species, the majority are incomplete, highly fragmented, and often riddled with assembly …
species, the majority are incomplete, highly fragmented, and often riddled with assembly …
High-throughput sequencing for algal systematics
In recent years, the use of molecular data in algal systematics has increased as high-
throughput sequencing (HTS) has become more accessible, generating very large datasets …
throughput sequencing (HTS) has become more accessible, generating very large datasets …
An open and continuously updated fern tree of life
Ferns, with about 12,000 species, are the second most diverse lineage of vascular plants
after angiosperms. They have been the subject of numerous molecular phylogenetic studies …
after angiosperms. They have been the subject of numerous molecular phylogenetic studies …
Large-scale phylogenomic analysis resolves a backbone phylogeny in ferns
Background Ferns, originated about 360 million years ago, are the sister group of seed
plants. Despite the remarkable progress in our understanding of fern phylogeny, with …
plants. Despite the remarkable progress in our understanding of fern phylogeny, with …
Simultaneous diversification of Polypodiales and angiosperms in the Mesozoic
Comprising about 82% of the extant fern species diversity, Polypodiales are generally
believed to have diversified in the Late Cretaceous. We estimated the divergence times of …
believed to have diversified in the Late Cretaceous. We estimated the divergence times of …
A well-resolved fern nuclear phylogeny reveals the evolution history of numerous transcription factor families
Ferns account for 80% of nonflowering vascular plant species and are the sister lineage of
seed plants. Recent molecular phylogenetics have greatly advanced understanding of fern …
seed plants. Recent molecular phylogenetics have greatly advanced understanding of fern …
Tree of life for the genera of Chinese vascular plants
We reconstructed a phylogenetic tree of Chinese vascular plants (Tracheophyta) using
sequences of the chloroplast genes atpB, matK, ndhF, and rbcL and mitochondrial matR. We …
sequences of the chloroplast genes atpB, matK, ndhF, and rbcL and mitochondrial matR. We …
Plastid phylogenomics resolve deep relationships among eupolypod II ferns with rapid radiation and rate heterogeneity
R Wei, YH Yan, AJ Harris, JS Kang… - Genome Biology and …, 2017 - academic.oup.com
The eupolypods II ferns represent a classic case of evolutionary radiation and,
simultaneously, exhibit high substitution rate heterogeneity. These factors have been …
simultaneously, exhibit high substitution rate heterogeneity. These factors have been …
The Compositae tree of life in the age of phylogenomics
Comprising more than 25 000 species, the Sunflower Family (Compositae or Asteraceae) is
the largest family of flowering plants. Many of its lineages have experienced recent and …
the largest family of flowering plants. Many of its lineages have experienced recent and …