Extreme value statistics of correlated random variables: a pedagogical review
Extreme value statistics (EVS) concerns the study of the statistics of the maximum or the
minimum of a set of random variables. This is an important problem for any time-series and …
minimum of a set of random variables. This is an important problem for any time-series and …
Quantitative analyses of empirical fitness landscapes
IG Szendro, MF Schenk, J Franke, J Krug… - Journal of Statistical …, 2013 - iopscience.iop.org
The concept of a fitness landscape is a powerful metaphor that offers insight into various
aspects of evolutionary processes and guidance for the study of evolution. Until recently …
aspects of evolutionary processes and guidance for the study of evolution. Until recently …
[HTML][HTML] Quantifying the adaptive potential of an antibiotic resistance enzyme
For a quantitative understanding of the process of adaptation, we need to understand its
“raw material,” that is, the frequency and fitness effects of beneficial mutations. At present …
“raw material,” that is, the frequency and fitness effects of beneficial mutations. At present …
Adaptation in tunably rugged fitness landscapes: the rough Mount Fuji model
Much of the current theory of adaptation is based on Gillespie's mutational landscape model
(MLM), which assumes that the fitness values of genotypes linked by single mutational steps …
(MLM), which assumes that the fitness values of genotypes linked by single mutational steps …
Accessibility percolation in random fitness landscapes
J Krug - arXiv preprint arXiv:1903.11913, 2019 - arxiv.org
The fitness landscape encodes the mapping of genotypes to fitness and provides a succinct
representation of possible trajectories followed by an evolving population. Evolutionary …
representation of possible trajectories followed by an evolving population. Evolutionary …
Time between the maximum and the minimum of a stochastic process
We present an exact solution for the probability density function P (τ= t min-t max| T) of the
time difference between the minimum and the maximum of a one-dimensional Brownian …
time difference between the minimum and the maximum of a one-dimensional Brownian …
Universality classes of interaction structures for NK fitness landscapes
Kauffman's NK-model is a paradigmatic example of a class of stochastic models of genotypic
fitness landscapes that aim to capture generic features of epistatic interactions in multilocus …
fitness landscapes that aim to capture generic features of epistatic interactions in multilocus …
Analysis of adaptive walks on NK fitness landscapes with different interaction schemes
S Nowak, J Krug - Journal of Statistical Mechanics: Theory and …, 2015 - iopscience.iop.org
Fitness landscapes are genotype to fitness mappings commonly used in evolutionary
biology and computer science which are closely related to spin glass models. In this paper …
biology and computer science which are closely related to spin glass models. In this paper …
Virus evolution on fitness landscapes
P Schuster, PF Stadler - Viral Fitness and Evolution: Population Dynamics …, 2023 - Springer
The landscape paradigm is revisited in the light of evolution in simple systems. A brief
overview of different classes of fitness landscapes is followed by a more detailed discussion …
overview of different classes of fitness landscapes is followed by a more detailed discussion …
Evolutionary accessibility of modular fitness landscapes
B Schmiegelt, J Krug - Journal of Statistical Physics, 2014 - Springer
A fitness landscape is a mapping from the space of genetic sequences, which is modeled
here as a binary hypercube of dimension L, to the real numbers. We consider random …
here as a binary hypercube of dimension L, to the real numbers. We consider random …