Amyloid β protein and Alzheimer's disease: When computer simulations complement experimental studies
J Nasica-Labouze, PH Nguyen, F Sterpone… - Chemical …, 2015 - ACS Publications
Alzheimer's disease (AD) challenges our society with an annual estimated cost of $1.08
trillion in the United States alone by 2050. 1 AD is a progressive irreversible neurological …
trillion in the United States alone by 2050. 1 AD is a progressive irreversible neurological …
Protein aggregation: in silico algorithms and applications
Protein aggregation is a topic of immense interest to the scientific community due to its role
in several neurodegenerative diseases/disorders and industrial importance. Several in silico …
in several neurodegenerative diseases/disorders and industrial importance. Several in silico …
Dynamics of an intrinsically disordered protein reveal metastable conformations that potentially seed aggregation
Amyloid fibril deposits of the intrinsically disordered hIAPP peptide are found in 95% of type
II diabetes patients, and the aggregation of this peptide is suggested to induce apoptotic cell …
II diabetes patients, and the aggregation of this peptide is suggested to induce apoptotic cell …
Bacteria‐Responsive Self‐Assembly of Antimicrobial Peptide Nanonets for Trap‐and‐Kill of Antibiotic‐Resistant Strains
Bacterial trapping using nanonets is a ubiquitous immune defense mechanism against
infectious microbes. These nanonets can entrap microbial cells, effectively arresting their …
infectious microbes. These nanonets can entrap microbial cells, effectively arresting their …
Advances in the simulation of protein aggregation at the atomistic scale
M Carballo-Pacheco, B Strodel - The journal of physical chemistry …, 2016 - ACS Publications
Protein aggregation into highly structured amyloid fibrils is associated with various diseases
including Alzheimer's disease, Parkinson's disease, and type II diabetes. Amyloids can also …
including Alzheimer's disease, Parkinson's disease, and type II diabetes. Amyloids can also …
Fibril Elongation by Aβ17–42: Kinetic Network Analysis of Hybrid-Resolution Molecular Dynamics Simulations
W Han, K Schulten - Journal of the American Chemical Society, 2014 - ACS Publications
A critical step of β-amyloid fibril formation is fibril elongation in which amyloid-β monomers
undergo structural transitions to fibrillar structures upon their binding to fibril tips. The atomic …
undergo structural transitions to fibrillar structures upon their binding to fibril tips. The atomic …
Amyloid β-protein C-terminal fragments: Formation of cylindrins and β-barrels
In order to evaluate potential therapeutic targets for treatment of amyloidoses such as
Alzheimer's disease (AD), it is essential to determine the structures of toxic amyloid …
Alzheimer's disease (AD), it is essential to determine the structures of toxic amyloid …
Expanding the nanoarchitectural diversity through aromatic di-and tri-peptide coassembly: Nanostructures and molecular mechanisms
Molecular self-assembly is pivotal for the formation of ordered nanostructures, yet the
structural diversity obtained by the use of a single type of building block is limited …
structural diversity obtained by the use of a single type of building block is limited …
Simulations of protein aggregation: insights from atomistic and coarse-grained models
A Morriss-Andrews, JE Shea - The Journal of Physical Chemistry …, 2014 - ACS Publications
This Perspective highlights recent computational approaches to protein aggregation, from
coarse-grained models to atomistic simulations, using the islet amyloid polypeptide (IAPP) …
coarse-grained models to atomistic simulations, using the islet amyloid polypeptide (IAPP) …
Tachykinin neuropeptides and amyloid β (25–35) assembly: Friend or foe?
Amyloid β (Aβ) protein is responsible for Alzheimer's disease, and one of its important
fragments, Aβ (25–35), is found in the brain and has been shown to be neurotoxic …
fragments, Aβ (25–35), is found in the brain and has been shown to be neurotoxic …