Pseudomonas aeruginosa epidemic high-risk clones and their association with horizontally-acquired β-lactamases: 2020 update

E del Barrio-Tofiño, C López-Causapé… - International journal of …, 2020 - Elsevier
Pseudomonas aeruginosa global clones associated with multidrug-resistant (MDR) and
extensively drug-resistant (XDR) phenotypes, denominated high-risk clones, are a growing …

[HTML][HTML] Whole-genome sequencing-based resistome analysis of nosocomial multidrug-resistant non-fermenting Gram-negative pathogens from the Balkans

S Peykov, T Strateva - Microorganisms, 2023 - mdpi.com
Non-fermenting Gram-negative bacilli (NFGNB), such as Pseudomonas aeruginosa and
Acinetobacter baumannii, are among the major opportunistic pathogens involved in the …

[HTML][HTML] Metagenomic pipeline for identifying co-infections among distinct SARS-CoV-2 variants of concern: study cases from Alpha to Omicron

JA Molina-Mora, E Cordero-Laurent… - Scientific Reports, 2022 - nature.com
Concomitant infection or co-infection with distinct SARS-CoV-2 genotypes has been
reported as part of the epidemiological surveillance of the COVID-19 pandemic. In the …

SARS-CoV-2 genomic surveillance in Costa Rica: Evidence of a divergent population and an increased detection of a spike T1117I mutation

JA Molina-Mora, E Cordero-Laurent, A Godínez… - Infection, Genetics and …, 2021 - Elsevier
Genome sequencing is a key strategy in the surveillance of SARS-CoV-2, the virus
responsible for the COVID-19 pandemic. Latin America is the hardest-hit region of the world …

[HTML][HTML] National surveillance pilot study unveils a multicenter, clonal outbreak of VIM-2-producing Pseudomonas aeruginosa ST111 in the Netherlands between …

J Pirzadian, MC Persoon, JA Severin, CHW Klaassen… - Scientific reports, 2021 - nature.com
Abstract Verona Integron-encoded Metallo-beta-lactamase (VIM) is the most frequently-
encountered carbapenemase in the healthcare-related pathogen Pseudomonas …

[HTML][HTML] Survey on carbapenem-resistant bacteria in pigs at slaughter and comparison with human clinical isolates in Italy

S Bonardi, CS Cabassi, G Manfreda, A Parisi… - Antibiotics, 2022 - mdpi.com
This study is focused on resistance to carbapenems and third-generation cephalosporins in
Gram-negative microorganisms isolated from swine, whose transmission to humans via pork …

[HTML][HTML] Transcriptomic determinants of the response of ST-111 Pseudomonas aeruginosa AG1 to ciprofloxacin identified by a top-down systems biology approach

JA Molina-Mora, D Chinchilla-Montero… - Scientific Reports, 2020 - nature.com
Pseudomonas aeruginosa is an opportunistic pathogen that thrives in diverse environments
and causes a variety of human infections. Pseudomonas aeruginosa AG1 (PaeAG1) is a …

[HTML][HTML] Molecular Determinants of Antibiotic Resistance in the Costa Rican Pseudomonas aeruginosa AG1 by a Multi-omics Approach: A Review of 10 Years of …

JA Molina-Mora, F García - Phenomics, 2021 - Springer
Abstract Pseudomonas aeruginosa AG1 (PaeAG1) is a Costa Rican strain that was isolated
in 2010 in a major Hospital. This strain has resistance to multiple antibiotics such as β …

[HTML][HTML] A chromosome-level genome assembly of tomato pinworm, Tuta absoluta

Y Liu, X Chen, Y Yin, X Li, K He, X Zhao, X Li, X Luo… - Scientific Data, 2023 - nature.com
The tomato pinworm, Tuta absoluta, or Phthorimaea absouta, is native to South America, but
quickly spread to other regions of world, including Europe, Africa, and Asia, devastating to …

[HTML][HTML] Functional genome annotation and transcriptome analysis of Pseudozyma hubeiensis BOT-O, an oleaginous yeast that utilizes glucose and xylose at equal …

F Mierke, DP Brink, J Norbeck, V Siewers… - Fungal Genetics and …, 2023 - Elsevier
Pseudozyma hubeiensis is a basidiomycete yeast that has the highly desirable traits for
lignocellulose valorisation of being equally efficient at utilization of glucose and xylose, and …