Synchronous diversification of Sulawesi's iconic artiodactyls driven by recent geological events

LAF Frantz, A Rudzinski… - … of the Royal …, 2018 - royalsocietypublishing.org
The high degree of endemism on Sulawesi has previously been suggested to have vicariant
origins, dating back to 40 Ma. Recent studies, however, suggest that much of Sulawesi's …

Candidate signatures of positive selection for environmental adaptation in indigenous African cattle: A review

S Kambal, A Tijjani, SAE Ibrahim, MKA Ahmed… - Animal …, 2023 - Wiley Online Library
Environmental adaptation traits of indigenous African cattle are increasingly being
investigated to respond to the need for sustainable livestock production in the context of …

Identification of large selective sweeps associated with major genes in cattle

T Druet, L Pérez‐Pardal, C Charlier… - Animal genetics, 2013 - Wiley Online Library
Selection for new favorable variants can lead to selective sweeps. However, such sweeps
might be rare in the evolution of different species for which polygenic adaptation or selection …

Inference of selective sweep parameters through supervised learning

IV Caldas, AG Clark, PW Messer - bioRxiv, 2022 - biorxiv.org
A selective sweep occurs when positive selection drives an initially rare allele to high
population frequency. In nature, the precise parameters of a sweep are seldom known: How …

Positive selection acts on regulatory genetic variants in populations of European ancestry that affect ALDH2 gene expression

H Schaschl, T Göllner, DL Morris - Scientific Reports, 2022 - nature.com
ALDH2 is a key enzyme in alcohol metabolism that protects cells from acetaldehyde toxicity.
Using iHS, iSAFE and F ST statistics, we identified regulatory acting variants affecting …

Estimating the ages of selection signals from different epochs in human history

S Nakagome, G Alkorta-Aranburu… - Molecular Biology …, 2016 - academic.oup.com
Genetic variation harbors signatures of natural selection driven by selective pressures that
are often unknown. Estimating the ages of selection signals may allow reconstructing the …

Selective sweeps under dominance and inbreeding

M Hartfield, T Bataillon - G3: Genes, Genomes, Genetics, 2020 - academic.oup.com
A major research goal in evolutionary genetics is to uncover loci experiencing positive
selection. One approach involves finding 'selective sweeps' patterns, which can either be …

Molecular diversity and selective sweeps in maize inbred lines adapted to African highlands

D Wegary, A Teklewold, BM Prasanna, BT Ertiro… - Scientific reports, 2019 - nature.com
Little is known on maize germplasm adapted to the African highland agro-ecologies. In this
study, we analyzed high-density genotyping by sequencing (GBS) data of 298 African …

Modeling the spatiotemporal spread of beneficial alleles using ancient genomes

RA Muktupavela, M Petr, L Ségurel, T Korneliussen… - Elife, 2022 - elifesciences.org
Ancient genome sequencing technologies now provide the opportunity to study natural
selection in unprecedented detail. Rather than making inferences from indirect footprints left …

Unveiling recent and ongoing adaptive selection in human populations

Z Gao - Plos Biology, 2024 - journals.plos.org
Genome-wide scans for signals of selection have become a routine part of the analysis of
population genomic variation datasets and have resulted in compelling evidence of …